Some Help

Query: NC_009831:4447919 Shewanella sediminis HAW-EB3, complete genome

Start: 4447919, End: 4471909, Length: 23991

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009901:40281754028175404725419080Shewanella pealeana ATCC 700345, complete genome01760BLASTN svgBLASTP svg
NC_014012:3812754*3812754383429621543Shewanella violacea DSS12, complete genome9e-102379BLASTN svgBLASTP svg
NC_008750:80744680744683071223267Shewanella sp. W3-18-1, complete genome6e-60240BLASTN svgBLASTP svg
NC_004460:97373897373899864424907Vibrio vulnificus CMCP6 chromosome II, complete sequence2e-41178BLASTN svgBLASTP svg
NC_009831:45399524539952458002840077Shewanella sediminis HAW-EB3, complete genome6e-23117BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome2e-19105BLASTN svgBLASTP svg
NC_004347:79189779189781264920753Shewanella oneidensis MR-1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009901:22722062272206230998537780Shewanella pealeana ATCC 700345, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_013166:78433978433980500320665Kangiella koreensis DSM 16069, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014541:27366412736641275872122081Ferrimonas balearica DSM 9799 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009831:20458112045811206913323323Shewanella sediminis HAW-EB3, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009092:37323903732390375553223143Shewanella loihica PV-4, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014541:14146271414627144361328987Ferrimonas balearica DSM 9799 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018697:82505882505884406019003Cycloclasticus sp. P1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008345:27179452717945274112723183Shewanella frigidimarina NCIMB 400, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008322:37585003758500378050122002Shewanella sp. MR-7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010506:49515004951500497315021651Shewanella woodyi ATCC 51908, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008345:37569773756977377563418658Shewanella frigidimarina NCIMB 400, complete genome7e-0763.9BLASTN svgBLASTP svg