Query: NC_009831:4447919 Shewanella sediminis HAW-EB3, complete genome
Start: 4447919, End: 4471909, Length: 23991
Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009901:4028175 | 4028175 | 4047254 | 19080 | Shewanella pealeana ATCC 700345, complete genome | 0 | 1760 | BLASTN svg | BLASTP svg |
| NC_014012:3812754* | 3812754 | 3834296 | 21543 | Shewanella violacea DSS12, complete genome | 9e-102 | 379 | BLASTN svg | BLASTP svg |
| NC_008750:807446 | 807446 | 830712 | 23267 | Shewanella sp. W3-18-1, complete genome | 6e-60 | 240 | BLASTN svg | BLASTP svg |
| NC_004460:973738 | 973738 | 998644 | 24907 | Vibrio vulnificus CMCP6 chromosome II, complete sequence | 2e-41 | 178 | BLASTN svg | BLASTP svg |
| NC_009831:4539952 | 4539952 | 4580028 | 40077 | Shewanella sediminis HAW-EB3, complete genome | 6e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_009997:5188221 | 5188221 | 5227958 | 39738 | Shewanella baltica OS195, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_004347:791897 | 791897 | 812649 | 20753 | Shewanella oneidensis MR-1, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_009901:2272206 | 2272206 | 2309985 | 37780 | Shewanella pealeana ATCC 700345, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_013166:784339 | 784339 | 805003 | 20665 | Kangiella koreensis DSM 16069, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_014541:2736641 | 2736641 | 2758721 | 22081 | Ferrimonas balearica DSM 9799 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_009831:2045811 | 2045811 | 2069133 | 23323 | Shewanella sediminis HAW-EB3, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_009092:3732390 | 3732390 | 3755532 | 23143 | Shewanella loihica PV-4, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_014541:1414627 | 1414627 | 1443613 | 28987 | Ferrimonas balearica DSM 9799 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_018697:825058 | 825058 | 844060 | 19003 | Cycloclasticus sp. P1 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008345:2717945 | 2717945 | 2741127 | 23183 | Shewanella frigidimarina NCIMB 400, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008322:3758500 | 3758500 | 3780501 | 22002 | Shewanella sp. MR-7, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010506:4951500 | 4951500 | 4973150 | 21651 | Shewanella woodyi ATCC 51908, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_008345:3756977 | 3756977 | 3775634 | 18658 | Shewanella frigidimarina NCIMB 400, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |