Pre_GI: BLASTN Hits

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Query: NC_009831:2884851 Shewanella sediminis HAW-EB3, complete genome

Start: 2884851, End: 2912716, Length: 27866

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010334:27492502749250277313323884Shewanella halifaxensis HAW-EB4, complete genome2e-35159BLASTN svgBLASTP svg
NC_009901:24272912427291245245225162Shewanella pealeana ATCC 700345, complete genome2e-29139BLASTN svgBLASTP svg
NC_009901:35632643563264358409920836Shewanella pealeana ATCC 700345, complete genome4e-1281.8BLASTN svgBLASTP svg