Pre_GI: BLASTN Hits

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Query: NC_009831:1255995 Shewanella sediminis HAW-EB3, complete genome

Start: 1255995, End: 1278955, Length: 22961

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-31145BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome6e-29137BLASTN svgBLASTP svg
NC_009053:1668500*1668500169468326184Actinobacillus pleuropneumoniae L20, complete genome5e-91343BLASTN svgBLASTP svg
NC_010939:1633000*1633000166140328404Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete4e-73283BLASTN svgBLASTP svg
NC_013416:1429881*1429881145213822258Aggregatibacter actinomycetemcomitans D11S-1, complete genome8e-53216BLASTN svgBLASTP svg
NC_008260:2340824*2340824238894248119Alcanivorax borkumensis SK2, complete genome6e-66260BLASTN svgBLASTP svg
NC_021150:2026496*2026496204664620151Azotobacter vinelandii CA6, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_021150:49296704929670497270143032Azotobacter vinelandii CA6, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012560:2026483*2026483204663320151Azotobacter vinelandii DJ, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012560:49296834929683497271443032Azotobacter vinelandii DJ, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004545:15650*156506959953950Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010552:752007*75200777809926093Burkholderia ambifaria MC40-6 chromosome 2, complete sequence6e-38167BLASTN svgBLASTP svg
NC_012721:1986436*1986436201260326168Burkholderia glumae BGR1 chromosome 2, complete genome4e-27131BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete4e-33151BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete4e-33151BLASTN svgBLASTP svg
NC_010676:2869936*2869936289564625711Burkholderia phytofirmans PsJN chromosome 2, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_009078:2351046*2351046237054119496Burkholderia pseudomallei 1106a chromosome II, complete sequence6e-35157BLASTN svgBLASTP svg
NC_007435:1077792*1077792110044222651Burkholderia pseudomallei 1710b chromosome II, complete sequence1e-32149BLASTN svgBLASTP svg
NC_009075:2428248*2428248244904320796Burkholderia pseudomallei 668 chromosome II, complete sequence9e-28133BLASTN svgBLASTP svg
NC_006351:2398403*2398403241919020788Burkholderia pseudomallei K96243 chromosome 2, complete sequence1e-32149BLASTN svgBLASTP svg
NC_007509:64400064400066633222333Burkholderia sp. 383 chromosome 3, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_015947:3991696*3991696401521623521Burkholderia sp. JV3 chromosome, complete genome6e-35157BLASTN svgBLASTP svg
NC_007650:722961*72296174620423244Burkholderia thailandensis E264 chromosome II, complete sequence6e-38167BLASTN svgBLASTP svg
NC_009465:90000*9000013018540186Candidatus Vesicomyosocius okutanii HA, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015856:1182974*1182974120901726044Collimonas fungivorans Ter331 chromosome, complete genome3e-40174BLASTN svgBLASTP svg
NC_009727:357206*35720637934622141Coxiella burnetii Dugway 7E9-12, complete genome1e-26129BLASTN svgBLASTP svg
NC_002971:1523065*1523065154336920305Coxiella burnetii RSA 493, complete genome1e-26129BLASTN svgBLASTP svg
NC_009952:2381601*2381601241824736647Dinoroseobacter shibae DFL 12, complete genome2e-19105BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome6e-174618BLASTN svgBLASTP svg
NC_014306:64215264215266635524204Erwinia billingiae Eb661, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015497:37940003794000381999125992Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007645:6407370*6407370643016222793Hahella chejuensis KCTC 2396, complete genome6e-69270BLASTN svgBLASTP svg
NC_007645:35811143581114360707925966Hahella chejuensis KCTC 2396, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014323:961825*96182598122819404Herbaspirillum seropedicae SmR1 chromosome, complete genome4e-39170BLASTN svgBLASTP svg
NC_007947:2447635*2447635249025042616Methylobacillus flagellatus KT, complete genome6e-29137BLASTN svgBLASTP svg
NC_012968:2228943*2228943225222323281Methylotenera mobilis JLW8, complete genome3e-37165BLASTN svgBLASTP svg
NC_012969:2476318*2476318252045544138Methylovorus glucosetrophus SIP3-4 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_014733:2363838*2363838239108027243Methylovorus sp. MP688 chromosome, complete genome9e-28133BLASTN svgBLASTP svg
NC_014837:3739408*3739408376471125304Pantoea sp. At-9b chromosome, complete genome7e-121442BLASTN svgBLASTP svg
NC_008463:632869*63286965598423116Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-70274BLASTN svgBLASTP svg
NC_015379:6226661*6226661626523538575Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-94355BLASTN svgBLASTP svg
NC_015379:4691868*4691868471845126584Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1489.7BLASTN svgBLASTP svg
NC_015410:3209954*3209954323120121248Pseudomonas mendocina NK-01 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome3e-95357BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome8e-90339BLASTN svgBLASTP svg
NC_015733:443122*44312246159918478Pseudomonas putida S16 chromosome, complete genome9e-102379BLASTN svgBLASTP svg
NC_009434:796878*79687882874331866Pseudomonas stutzeri A1501, complete genome2e-68268BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome2e-124454BLASTN svgBLASTP svg
NC_004578:568236*56823659272224487Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-119438BLASTN svgBLASTP svg
NC_007912:909112*90911293451825407Saccharophagus degradans 2-40, complete genome3e-46194BLASTN svgBLASTP svg
NC_009092:11270001127000115148224483Shewanella loihica PV-4, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014012:20728920728922623418946Shewanella violacea DSS12, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013959:2449315*2449315247282523511Sideroxydans lithotrophicus ES-1 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_014484:1163576*1163576120142437849Spirochaeta thermophila DSM 6192 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011071:4000620*4000620403191731298Stenotrophomonas maltophilia R551-3, complete genome1e-32149BLASTN svgBLASTP svg
NC_014623:7331860*7331860735320421345Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011901:13983761398376142787629501Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete2e-136494BLASTN svgBLASTP svg
NC_004603:37032037032039589225573Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete3e-0661.9BLASTN svgBLASTP svg
NC_007086:4489153*4489153450718918037Xanthomonas campestris pv. campestris str. 8004, complete genome2e-41178BLASTN svgBLASTP svg
NC_003902:4430621*4430621444960618986Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-41178BLASTN svgBLASTP svg
NC_007508:4476726*4476726449836521640Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome7e-41176BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,5e-122446BLASTN svgBLASTP svg
NC_008149:587689*58768961062122933Yersinia pestis Nepal516, complete genome2e-112414BLASTN svgBLASTP svg
NC_006155:40620004062000408523223233Yersinia pseudotuberculosis IP 32953, complete genome4e-0867.9BLASTN svgBLASTP svg