Pre_GI: BLASTP Hits

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Query: NC_009831:3583856:3583856 Shewanella sediminis HAW-EB3, complete genome

Start: 3583856, End: 3585583, Length: 1728

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009831:3612206:3615825361582536175521728Shewanella sediminis HAW-EB3, complete genomeTrkA-C domain protein0954
NC_009092:1599526:1638702163870216404291728Shewanella loihica PV-4, complete genomeTrkA-C domain protein0892
NC_013422:1604157:1621738162173816234771740Halothiobacillus neapolitanus c2, complete genomeTrkA-C domain protein3e-114412
NC_007645:2779381:2819300281930028210391740Hahella chejuensis KCTC 2396, complete genomeDi- and tricarboxylate transporters2e-99363
NC_010814:1551624:1607954160795416097291776Geobacter lovleyi SZ, complete genomeTrkA-C domain protein2e-84313
NC_014926:608894:6143656143656161371773Thermovibrio ammonificans HB-1 chromosome, complete genomeTrkA-C domain protein1e-71270
NC_007963:1908964:1912082191208219138481767Chromohalobacter salexigens DSM 3043, complete genomeTrkA-like protein6e-68258
NC_018691:1822731:1822731182273118245031773Alcanivorax dieselolei B5 chromosome, complete genomeTrkA-like protein8e-68258
NC_015731:1731896:1731896173189617336711776Nitrosomonas sp. Is79A3 chromosome, complete genomeTrkA-C domain-containing protein4e-67256
NC_009337:715500:7373387373387391191782Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeTrkA domain-containing protein2e-64246
NC_014829:4057318:4067423406742340691981776Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeTrkA-C domain protein5e-61236
NC_009439:2038303:2051770205177020535331764Pseudomonas mendocina ymp, complete genomecitrate transporter1e-60234
NC_011059:1896593:1908072190807219098531782Prosthecochloris aestuarii DSM 271, complete genomeTrkA-C domain protein1e-60234
NC_014532:1579419:1579419157941915811821764Halomonas elongata DSM 2581, complete genomeTrkA-C domain protein5e-60232
NC_009434:608765:6376116376116394071797Pseudomonas stutzeri A1501, complete genomesodium/sulfate symporter family transporter3e-48193
NC_008319:171847:2030882030882048421755Synechococcus sp. CC9311, complete genomeDi/tricarboxylate transporter2e-44181
NC_014297:476510:4765104765104783181809Halalkalicoccus jeotgali B3 chromosome, complete genomearsenite transport protein1e-36154
NC_015161:1748236:1751056175105617528371782Deinococcus proteolyticus MRP chromosome, complete genomeCitrate transporter2e-36154
NC_014759:4133809:4146497414649741482901794Marivirga tractuosa DSM 4126 chromosome, complete genomecitrate transporter3e-35150
NC_009615:919495:9332429332429347951554Parabacteroides distasonis ATCC 8503 chromosome, complete genomeNa+/sulfate symporter3e-33144
NC_010554:1871000:1893195189319518950241830Proteus mirabilis HI4320, complete genomecation transporter6e-31136
NC_013166:194614:2138952138952157241830Kangiella koreensis DSM 16069, complete genomeTrkA-C domain protein3e-29130
NC_015733:3736104:3736104373610437379331830Pseudomonas putida S16 chromosome, complete genomecitrate transporter1e-26121
NC_013889:1740858:1765213176521317670331821Thioalkalivibrio sp. K90mix chromosome, complete genomeCitrate transporter4e-23109
NC_011883:1601552:1620760162076016225891830Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Citrate transporter5e-23109
NC_009767:3335021:3338657333865733404741818Roseiflexus castenholzii DSM 13941, complete genomeTrkA-C domain protein3e-22107
NC_018080:1100047:1102600110260011044321833Pseudomonas aeruginosa DK2 chromosome, complete genomesodium:sulfate symporter1e-21105
NC_011770:1226923:1228025122802512298571833Pseudomonas aeruginosa LESB58, complete genomeputative sodium:sulfate symporter1e-21105
NC_007760:3948730:3948730394873039505411812Anaeromyxobacter dehalogenans 2CP-C, complete genomeTrkA-C1e-21105
NC_008463:1223012:1224114122411412259461833Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative sodium/sulphate transporter2e-21104
NC_002516:4285477:4300117430011743019491833Pseudomonas aeruginosa PAO1, complete genomeprobable sodium:sulfate symporter9e-21102
NC_019902:1061432:1097802109780210996191818Thioalkalivibrio nitratireducens DSM 14787, complete genomeSLC13 permease family protein2e-20101
NC_018000:1207231:1214567121456712163451779Sinorhizobium fredii USDA 257 chromosome, complete genometransporter2e-20101
NC_011901:3363500:3385155338515533869961842Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeTrkA-C domain-containing protein4e-20100
NC_013173:1259898:1292156129215612939701815Desulfomicrobium baculatum DSM 4028, complete genomeCitrate transporter8e-2099
NC_010718:2860096:2860096286009628613401245Natranaerobius thermophilus JW/NM-WN-LF, complete genomeanion transporter6e-1996.3
NC_008380:4078670:4094511409451140962531743Rhizobium leguminosarum bv. viciae 3841, complete genomeputative transmembrane transporter protein2e-1894.4
NC_014836:155924:1559241559241577771854Desulfurispirillum indicum S5 chromosome, complete genomeCitrate transporter3e-1894
NC_012850:3454270:3469578346957834713231746Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeCitrate transporter9e-1685.9
NC_013850:4612812:4622887462288746241491263Klebsiella variicola At-22 chromosome, complete genomeanion transporter2e-1584.7
NC_011283:4767269:4777344477734447786061263Klebsiella pneumoniae 342 chromosome, complete genometransporter divalent anion:Na+ symporter (DASS) family2e-1584.7
NC_011274:793681:8055978055978068651269Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cation transporter5e-1583.2
NC_010102:2287934:2294382229438222956501269Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-1582.8
NC_011083:862901:8767898767898780571269Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,anion transporter7e-1582.8
NC_011205:839425:8527338527338540011269Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853anion transporter7e-1582.8
NC_016810:819489:8278068278068290741269Salmonella enterica subsp. enterica serovar Typhimurium strputative cation transporter7e-1582.8
NC_016857:819429:8278068278068290741269Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative divalent ion symporter7e-1582.8
NC_017046:819414:8277918277918290591269Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation transporter7e-1582.8
NC_010994:3666651:3682507368250736842491743Rhizobium etli CIAT 652, complete genomeputative transporter protein7e-1582.8
NC_016863:819478:8289138289138301601248Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cation transporter6e-1582.8
NC_016856:819482:8289138289138301601248Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cation transporter6e-1582.8
NC_003197:815964:8285718285718298181248Salmonella typhimurium LT2, complete genomeputative cation transporter6e-1582.8
NC_012125:793812:8057508057508070181269Salmonella enterica subsp. enterica serovar Paratyphi C straincation transporter6e-1582.8
NC_016860:857500:8673808673808686481269Salmonella enterica subsp. enterica serovar Typhimurium stranion transporter7e-1582.8
NC_013009:122000:1386461386461403341689Neorickettsia risticii str. Illinois, complete genomeputative transporter1e-1482
NC_011080:819103:8329038329038341711269Salmonella enterica subsp. enterica serovar Newport str. SL254,anion transporter1e-1482
NC_011149:779903:7922257922257934931269Salmonella enterica subsp. enterica serovar Agona str. SL483,anion transporter1e-1482
NC_016831:2209834:2216286221628622175541269Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1480.9
NC_006905:848000:8571968571968584641269Salmonella enterica subsp. enterica serovar Choleraesuis strputative cation transporter3e-1480.5
NC_012881:2957309:2958478295847829602831806Desulfovibrio salexigens DSM 2638, complete genomeCitrate transporter5e-1479.7
NC_007519:1244198:1266034126603412673801347Desulfovibrio alaskensis G20 chromosome, complete genomecation transporter1e-1378.6
NC_009648:838000:8487758487758500431269Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative response regulator, membrane protein2e-1377.8
NC_007761:3564449:3581024358102435827661743Rhizobium etli CFN 42, complete genomeprobable cation transporter protein5e-1376.3
NC_014624:287500:2952402952402965141275Eubacterium limosum KIST612 chromosome, complete genometransporter4e-1273.6
NC_007798:112840:1275561275561291571602Neorickettsia sennetsu str. Miyayama, complete genomeputative transporter5e-1273.2
NC_016147:586433:5872725872725891431872Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative transmembrane transporter1e-1171.6
NC_007086:1224867:1224867122486712267291863Xanthomonas campestris pv. campestris str. 8004, complete genomesulfur deprivation response regulator1e-1068.9
NC_003902:3666544:3732791373279137346531863Xanthomonas campestris pv. campestris str. ATCC 33913, completesulfur deprivation response regulator1e-1068.9
NC_016599:513357:5311825311825325971416Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeanion transporter2e-0860.8
NC_016048:3899878:3909090390909039103611272Oscillibacter valericigenes Sjm18-20, complete genomecitrate transporter family protein8e-0859.3
NC_009092:2902171:2929103292910329304941392Shewanella loihica PV-4, complete genomeanion transporter2e-0757.8
NC_018524:2423016:2441234244123424427991566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein3e-0757.4
NC_018524:2423016:2442893244289324444581566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein5e-0756.6
NC_014541:1231021:1234607123460712359981392Ferrimonas balearica DSM 9799 chromosome, complete genomeanion transporter6e-0756.6
NC_009707:36024:5459854598559651368Campylobacter jejuni subsp. doylei 269.97 chromosome, completeCitT protein3e-0653.9
NC_010519:71365:9273592735941231389Haemophilus somnus 2336 chromosome, complete genomeanion transporter1e-0552.4
NC_008309:190550:2195322195322209201389Haemophilus somnus 129PT, complete genomeconserved transporter, NadC family1e-0552.4
NC_006138:857692:8633748633748652541881Desulfotalea psychrophila LSv54, complete genomesimilar to Na/dicarboxylate cotransporter1e-0552.4