Pre_GI: BLASTP Hits

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Query: NC_009831:2884851:2890472 Shewanella sediminis HAW-EB3, complete genome

Start: 2890472, End: 2891923, Length: 1452

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009901:2427291:2433784243378424350881305Shewanella pealeana ATCC 700345, complete genomePeptidoglycan-binding domain 1 protein1e-70267
NC_010334:2749250:2769167276916727705011335Shewanella halifaxensis HAW-EB4, complete genomePeptidoglycan-binding domain 1 protein6e-68258
NC_007626:2354260:2404247240424724058541608Magnetospirillum magneticum AMB-1, complete genomehypothetical protein5e-52205
NC_005126:2063667:2083583208358320849381356Photorhabdus luminescens subsp. laumondii TTO1, complete genome7e-48192
NC_009663:2500186:2502798250279825044741677Sulfurovum sp. NBC37-1, complete genomehypothetical protein2e-46187
NC_015277:380624:3958923958923975381647Sphingobacterium sp. 21 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein3e-46186
NC_016745:2913712:2935636293563629370871452Oceanimonas sp. GK1 chromosome, complete genomecell wall degradation protein2e-43177
NC_015276:1947936:1949822194982219515101689Marinomonas mediterranea MMB-1 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein5e-43176
NC_008639:2460033:2479552247955224812431692Chlorobium phaeobacteroides DSM 266, complete genomePeptidoglycan-binding domain 1 protein3e-41170
NC_003317:1030220:1052069105206910536641596Brucella melitensis 16M chromosome I, complete sequencecell wall degradation protein6e-41169
NC_009952:1680682:1683367168336716849771611Dinoroseobacter shibae DFL 12, complete genomehypothetical protein5e-41169
NC_014500:2934232:2949982294998229516701689Dickeya dadantii 3937 chromosome, complete genomeputative carboxypeptidase7e-41168
NC_016778:96792:1186541186541206662013Brucella canis HSK A52141 chromosome 1, complete sequencecell wall degradation protein8e-40165
NC_014972:3688000:3692153369215336940631911Desulfobulbus propionicus DSM 2032 chromosome, complete genomeErfK/YbiS/YcfS/YnhG family protein6e-39162
NC_003911:2042389:2056316205631620579291614Silicibacter pomeroyi DSS-3, complete genomepeptidoglycan binding protein, putative7e-39162
NC_010172:1522707:1544587154458715458911305Methylobacterium extorquens PA1, complete genomePeptidoglycan-binding domain 1 protein6e-37155
NC_011369:1135592:1187040118704011883411302Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completepeptidoglycan-binding protein2e-36154
NC_008686:1180388:1202142120214212037491608Paracoccus denitrificans PD1222 chromosome 1, complete sequencePeptidoglycan-binding domain 1 protein3e-36153
NC_016795:1441024:146288314628831463314432Brucella abortus A13334 chromosome 1, complete sequencecell wall degradation protein6e-23109
NC_014033:1664500:1682674168267416841641491Prevotella ruminicola 23 chromosome, complete genomeputative lipoprotein7e-23108