Pre_GI: BLASTP Hits

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Query: NC_009831:2884851:2886343 Shewanella sediminis HAW-EB3, complete genome

Start: 2886343, End: 2887167, Length: 825

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010334:2749250:276520927652092766021813Shewanella halifaxensis HAW-EB4, complete genomeSAF domain protein8e-96350
NC_009901:2427291:243823124382312439049819Shewanella pealeana ATCC 700345, complete genomeSAF domain protein1e-92339
NC_016613:2759908:278215427821542782870717Vibrio sp. EJY3 chromosome 1, complete sequenceFlp pilus assembly protein CpaB4e-41168
NC_015379:5002595:500398250039825004797816Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative exported protein2e-33142
NC_016830:4914406:491579449157944916543750Pseudomonas fluorescens F113 chromosome, complete genomeprotein RcpC/CpaB4e-29128
NC_016002:2453919:248796324879632488814852Pseudogulbenkiania sp. NH8B, complete genomeFlp pilus assembly protein CpaB8e-28124
NC_007614:2675302:268803526880352688820786Nitrosospira multiformis ATCC 25196 chromosome 1, completeFlp pilus assembly CpaB2e-26119
NC_011894:2618951:265212926521292653052924Methylobacterium nodulans ORS 2060, complete genomeFlp pilus assembly protein CpaB1e-24113
NC_002932:440191:448662448662449498837Chlorobium tepidum TLS, complete genomehypothetical protein3e-23108
NC_008536:5259438:527804752780475278949903Solibacter usitatus Ellin6076, complete genomeSAF domain5e-21101
NC_008609:2933468:294536229453622946237876Pelobacter propionicus DSM 2379, complete genomeSAF domain7e-1787.8
NC_009511:5362705:536505753650575366055999Sphingomonas wittichii RW1 chromosome, complete genomeSAF domain-containing protein1e-1377
NC_013223:1349000:137266213726621373549888Desulfohalobium retbaense DSM 5692, complete genomeFlp pilus assembly protein CpaB1e-1273.9
NC_007794:1553000:155982215598221560604783Novosphingobium aromaticivorans DSM 12444, complete genomeFlp pilus assembly CpaB6e-1271.6
NC_010718:2460893:246659024665902467291702Natranaerobius thermophilus JW/NM-WN-LF, complete genomeFlp pilus assembly protein CpaB1e-1170.5
NC_004463:3857763:386238838623883863377990Bradyrhizobium japonicum USDA 110, complete genomeputative pilus assembly protein7e-1064.7
NC_011894:3885490:390345339034533904247795Methylobacterium nodulans ORS 2060, complete genomeFlp pilus assembly protein CpaB3e-0962.4
NC_014931:5594946:559879955987995599782984Variovorax paradoxus EPS chromosome, complete genomeFlp pilus assembly protein CpaB2e-0756.6
NC_015594:332432:342730342730343635906Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeFlp pilus assembly protein CpaB6e-0754.7
NC_012791:4680500:468451846845184685513996Variovorax paradoxus S110 chromosome 1, complete genomeFlp pilus assembly protein CpaB9e-0754.3
NC_021171:4549673:456515045651504565707558Bacillus sp. 1NLA3E, complete genomeSAF domain-containing protein2e-0653.5
NC_018691:198909:205934205934206857924Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein4e-0652.4