Pre_GI: BLASTN Hits

Some Help

Query: NC_009806:35990 Kineococcus radiotolerans SRS30216 plasmid pKRAD01, complete

Start: 35990, End: 59122, Length: 23133

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous.Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery.This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014815:5888934*5888934590800519072Micromonospora sp. L5 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_013441:28421342842134286273320600Gordonia bronchialis DSM 43247, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014151:81375581375584656132807Cellulomonas flavigena DSM 20109 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013441:27888062788806282218133376Gordonia bronchialis DSM 43247, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015671:25580825580830092445117Cellvibrio gilvus ATCC 13127 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018750:3141196*3141196316047319278Streptomyces venezuelae ATCC 10712, complete genome3e-0661.9BLASTN svgBLASTP svg