Pre_GI: BLASTP Hits

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Query: NC_009806:35990:43696 Kineococcus radiotolerans SRS30216 plasmid pKRAD01, complete

Start: 43696, End: 46068, Length: 2373

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous.Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery.This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013743:3681235:3681235368123536835592325Haloterrigena turkmenica DSM 5511, complete genometransglutaminase domain protein9e-23109
NC_019970:439969:4587804587804609152136Thermoanaerobacterium thermosaccharolyticum M0795, complete genometransglutaminase-like enzyme, predicted cysteine protease5e-21103
NC_015666:2721350:2739404273940427417972394Halopiger xanaduensis SH-6 chromosome, complete genometransglutaminase domain-containing protein2e-20101
NC_015555:386000:3881293881293902792151Thermoanaerobacterium xylanolyticum LX-11 chromosome, completetransglutaminase domain-containing protein2e-20101
NC_014831:388007:3880073880073907182712Thermaerobacter marianensis DSM 12885 chromosome, complete genometransglutaminase domain-containing protein9e-1892.8
NC_016010:1169850:1191600119160011935521953Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetransglutaminase-like protein1e-1792
NC_009523:379705:4014584014584039052448Roseiflexus sp. RS-1 chromosome, complete genometransglutaminase domain-containing protein2e-1791.7
NC_008025:1889891:1907391190739119102222832Deinococcus geothermalis DSM 11300, complete genometransglutaminase-like protein5e-1687
NC_012914:970000:9807689807689832392472Paenibacillus sp. JDR-2, complete genometransglutaminase domain protein2e-1585.5
NC_014355:288000:3008783008783030822205Candidatus Nitrospira defluvii, complete genomehypothetical protein3e-1584.3
NC_009848:582775:5839755839755861792205Bacillus pumilus SAFR-032, complete genomehypothetical protein5e-1583.6
NC_010475:2188827:2190845219084521932382394Synechococcus sp. PCC 7002, complete genomeTransglutaminase-like superfamily domain protein1e-1379
NC_012673:2152639:2152639215263921547382100Exiguobacterium sp. AT1b, complete genometransglutaminase domain protein2e-1378.6
NC_014394:1989418:1991272199127219932211950Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein2e-1275.1
NC_007298:2689731:2716080271608027180171938Dechloromonas aromatica RCB, complete genomeTransglutaminase-like3e-1274.3
NC_009925:1617414:1617414161741416196332220Acaryochloris marina MBIC11017, complete genometransglutaminase-like protein, putative2e-1068.6
NC_021182:4186515:4186515418651541887672253Clostridium pasteurianum BC1, complete genometransglutaminase-like enzyme, predicted cysteine protease3e-1067.8
NC_012778:2049694:2063841206384120660362196Eubacterium eligens ATCC 27750, complete genomehypothetical protein4e-1067.4
NC_013894:672840:6739036739036757981896Thermocrinis albus DSM 14484 chromosome, complete genometransglutaminase domain protein8e-1066.6
NC_008702:1153344:1174572117457211765511980Azoarcus sp. BH72, complete genomeconserved hypothetical membrane protein9e-1066.2
NC_015578:61820:9389593895979144020Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein3e-0964.3
NC_015410:2505168:2532060253206025340451986Pseudomonas mendocina NK-01 chromosome, complete genometransglutaminase domain-containing protein3e-0861.2
NC_014623:4535544:4576293457629345782871995Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransglutaminase-like superfamily domain-containing protein6e-0860.1
NC_005966:2157677:2169744216974421717411998Acinetobacter sp. ADP1, complete genomehypothetical protein3e-0758.2
NC_014217:2172464:218875121887512189587837Starkeya novella DSM 506 chromosome, complete genometransglutaminase domain protein7e-0653.5