Pre_GI: BLASTP Hits

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Query: NC_009806:35990:38117 Kineococcus radiotolerans SRS30216 plasmid pKRAD01, complete

Start: 38117, End: 39103, Length: 987

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous.Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery.This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014815:5888934:589129158912915891965675Micromonospora sp. L5 chromosome, complete genomecation efflux protein1e-55216
NC_014151:449732:451506451506452156651Cellulomonas flavigena DSM 20109 chromosome, complete genomecation efflux protein1e-20100
NC_013222:299683:360446360446361084639Robiginitalea biformata HTCC2501, complete genomeputative integral membrane protein2e-2099.8
NC_020156:737063:782957782957783598642Nonlabens dokdonensis DSW-6, complete genomeputative integral membrane protein2e-1997.1
NC_008726:3858209:387059838705983871314717Mycobacterium vanbaalenii PYR-1, complete genomeputative conserved integral membrane protein3e-1892.4
NC_017167:1648913:173409817340981734751654Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1cation efflux protein3e-1789.7
NC_013205:1123280:117406011740601174713654Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,cation efflux protein3e-1789.7
NC_017904:3084872:310634831063483106797450Mycobacterium sp. MOTT36Y chromosome, complete genomeintegral membrane protein3e-1066.2