Pre_GI: BLASTP Hits

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Query: NC_009806:35990:37785 Kineococcus radiotolerans SRS30216 plasmid pKRAD01, complete

Start: 37785, End: 38117, Length: 333

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous.Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery.This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014815:5888934:589196558919655892291327Micromonospora sp. L5 chromosome, complete genomeregulatory protein arsr6e-29125
NC_009806:35990:586165861659122507Kineococcus radiotolerans SRS30216 plasmid pKRAD01, completeregulatory protein ArsR1e-27121
NC_009342:135500:156396156396156719324Corynebacterium glutamicum R chromosome, complete genomehypothetical protein1e-25114
NC_009342:135500:161985161985162350366Corynebacterium glutamicum R chromosome, complete genomehypothetical protein1e-23108
NC_014151:370882:381083381083381442360Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, ArsR family4e-23106
NC_012803:2195808:223086622308662231225360Micrococcus luteus NCTC 2665, complete genometranscriptional regulator, ArsR family1e-22104
NC_014218:1689002:169370116937011694090390Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometranscriptional regulator, ArsR family4e-22103
NC_015671:255808:268822268822269181360Cellvibrio gilvus ATCC 13127 chromosome, complete genomeregulatory protein ArsR9e-22102
NC_017904:3113000:311302131130213113350330Mycobacterium sp. MOTT36Y chromosome, complete genomeArsR family transcriptional regulator3e-21100
NC_012704:1701805:170536517053651705724360Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, ArsR family2e-2097.8
NC_013174:815155:834757834757835116360Jonesia denitrificans DSM 20603, complete genometranscriptional regulator, ArsR family2e-2097.8
NC_013172:2556517:256982725698272570186360Brachybacterium faecium DSM 4810, complete genometranscriptional regulator, ArsR family3e-1993.6
NC_010617:774914:793505793505793864360Kocuria rhizophila DC2201, complete genometranscription regulator ArsR7e-1992.4
NC_014210:618500:642426642426642764339Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, ArsR family5e-1889.7
NC_017955:1611037:161611416161141616434321Modestobacter marinus, complete genomeArsR family transcriptional regulator2e-1477.8
NC_009338:3029507:302909430290943029510417Mycobacterium gilvum PYR-GCK chromosome, complete genomeregulatory protein ArsR2e-0960.8
NC_016935:2503071:251799925179992518343345Paenibacillus mucilaginosus 3016 chromosome, complete genomeArsR family transcriptional regulator9e-0958.9
NC_015690:1967244:198678219867821987126345Paenibacillus mucilaginosus KNP414 chromosome, complete genomeArsR family transcriptional regulator9e-0958.9
NC_016932:1791868:180831218083121808710399Corynebacterium pseudotuberculosis 316 chromosome, complete genomeArsR-family transcription regulator2e-0858.2
NC_017300:1833772:183670318367031837101399Corynebacterium pseudotuberculosis 1002 chromosome, completeHTH-type transcriptional regulator CmtR2e-0858.2
NC_017303:1836500:183918918391891839587399Corynebacterium pseudotuberculosis I19 chromosome, complete genomeHTH-type transcriptional regulator CmtR2e-0858.2
NC_007333:1743890:180610118061011806532432Thermobifida fusca YX, complete genomeregulatory protein, ArsR2e-0857.8
NC_017079:2634623:265163326516332651965333Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative ArsR family transcriptional regulator2e-0857.4
NC_018524:5066720:507672650767265077079354Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory , arsR family protein6e-0856.2
NC_014814:2588628:260614626061462606535390Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, ArsR family1e-0755.5
NC_009338:3359500:335994733599473360336390Mycobacterium gilvum PYR-GCK chromosome, complete genomeregulatory protein ArsR1e-0755.5
NC_009338:630130:629744629744630133390Mycobacterium gilvum PYR-GCK chromosome, complete genomeregulatory protein ArsR1e-0755.5
NC_008726:3858209:387404838740483874452405Mycobacterium vanbaalenii PYR-1, complete genomeregulatory protein, ArsR1e-0755.1
NC_018664:985689:100172510017251002003279Clostridium acidurici 9a chromosome, complete genomeArsR familiy transcriptional regulator2e-0754.3
NC_014831:1906691:193494319349431935332390Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, ArsR family2e-0754.3
NC_013441:2788806:278842627884262788809384Gordonia bronchialis DSM 43247, complete genomeregulatory protein ArsR7e-0752.8
NC_011992:1179084:119655611965561196912357Acidovorax ebreus TPSY, complete genometranscriptional regulator, ArsR family7e-0752.8
NC_015519:2580310:258170125817012582009309Tepidanaerobacter sp. Re1 chromosome, complete genomeregulatory protein ArsR6e-0752.8
NC_014151:449732:451144451144451509366Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, ArsR family6e-0752.8
NC_010337:2950500:296767029676702967942273Heliobacterium modesticaldum Ice1, complete genometranscriptional regulator, arsr family8e-0752.4
NC_013730:2751484:277968527796852779984300Spirosoma linguale DSM 74, complete genometranscriptional regulator, ArsR family1e-0652
NC_017955:1611037:162999416299941630395402Modestobacter marinus, complete genomeArsR family transcriptional regulator1e-0652
NC_008750:1253354:127078312707831271136354Shewanella sp. W3-18-1, complete genomeregulatory protein, ArsR4e-0650.1
NC_013947:5682895:570717957071795707568390Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TrmB5e-0649.7
NC_015671:3093596:310706831070683107427360Cellvibrio gilvus ATCC 13127 chromosome, complete genomeregulatory protein ArsR7e-0649.3