Pre_GI: BLASTN Hits

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Query: NC_009801:995396 Escherichia coli E24377A, complete genome

Start: 995396, End: 1019468, Length: 24073

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: ETEC is the leading cause of traveler's diarrhea, characterized by a large volume of watery diarrhea. ETEC primarily colonizes the small intestine by way of the pili. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009801:2898426*2898426294876250337Escherichia coli E24377A, complete genome04193BLASTN svgBLASTP svg
NC_009801:3374501*3374501339880324303Escherichia coli E24377A, complete genome03465BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome01826BLASTN svgBLASTP svg
NC_007384:37417083741708376309921392Shigella sonnei Ss046, complete genome01818BLASTN svgBLASTP svg
NC_011750:3545466*3545466356309917634Escherichia coli IAI39 chromosome, complete genome01796BLASTN svgBLASTP svg
NC_009786:43331433316409920769Escherichia coli E24377A plasmid pETEC_80, complete sequence01766BLASTN svgBLASTP svg
NC_007384:1320287*1320287134781127525Shigella sonnei Ss046, complete genome01735BLASTN svgBLASTP svg
NC_007712:16014991601499163292631428Sodalis glossinidius str. 'morsitans', complete genome01174BLASTN svgBLASTP svg
NC_007384:16968311696831171856121731Shigella sonnei Ss046, complete genome01094BLASTN svgBLASTP svg
NC_007607:870008700012362836629Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence4e-138500BLASTN svgBLASTP svg
NC_014842:19411194114866829258Pantoea sp. At-9b plasmid pPAT9B05, complete sequence1e-137498BLASTN svgBLASTP svg
NC_010498:34885133488513350850119989Escherichia coli SMS-3-5, complete genome9e-136492BLASTN svgBLASTP svg
NC_003198:33131433131435709925786Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-134488BLASTN svgBLASTP svg
NC_004631:26159082615908263824422337Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-134488BLASTN svgBLASTP svg
NC_011083:33891033891036299924090Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-134488BLASTN svgBLASTP svg
NC_010660:864458644510942022976Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-133484BLASTN svgBLASTP svg
NC_006511:25405002540500256809927600Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-132480BLASTN svgBLASTP svg
NC_006905:32651732651735159925083Salmonella enterica subsp. enterica serovar Choleraesuis str3e-129470BLASTN svgBLASTP svg
NC_011751:37107863710786373513424349Escherichia coli UMN026 chromosome, complete genome5e-125456BLASTN svgBLASTP svg
NC_002128:35000350006549030491Escherichia coli O157:H7 str. Sakai plasmid pO157, complete3e-123450BLASTN svgBLASTP svg
NC_007414:56508565089199935492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence3e-123450BLASTN svgBLASTP svg
NC_002695:3994970*3994970401809923130Escherichia coli O157:H7 str. Sakai, complete genome5e-122446BLASTN svgBLASTP svg
AC_000091:3258377*3258377328148023104Escherichia coli W3110 DNA, complete genome3e-117430BLASTN svgBLASTP svg
NC_000913:3256307*3256307327821621910Escherichia coli K12, complete genome3e-117430BLASTN svgBLASTP svg
NC_009790:42112421126914727036Escherichia coli E24377A plasmid pETEC_74, complete sequence3e-117430BLASTN svgBLASTP svg
NC_009800:3307123*3307123332547318351Escherichia coli HS, complete genome3e-117430BLASTN svgBLASTP svg
NC_009801:35950013595001361359918599Escherichia coli E24377A, complete genome3e-117430BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome3e-117430BLASTN svgBLASTP svg
CP002185:3475991*3475991350005224062Escherichia coli W, complete genome2e-115424BLASTN svgBLASTP svg
CP002516:613462*61346263169018229Escherichia coli KO11, complete genome2e-115424BLASTN svgBLASTP svg
CU928145:3608917*3608917363276823852Escherichia coli 55989 chromosome, complete genome2e-115424BLASTN svgBLASTP svg
CU928160:3344746*3344746336309918354Escherichia coli IAI1 chromosome, complete genome2e-115424BLASTN svgBLASTP svg
NC_004337:32497913249791327283723047Shigella flexneri 2a str. 301, complete genome2e-115424BLASTN svgBLASTP svg
NC_004741:3240909*3240909326236621458Shigella flexneri 2a str. 2457T, complete genome2e-115424BLASTN svgBLASTP svg
NC_008258:32247213224721324719422474Shigella flexneri 5 str. 8401, complete genome2e-115424BLASTN svgBLASTP svg
NC_011748:3608917*3608917363276823852Escherichia coli 55989, complete genome2e-115424BLASTN svgBLASTP svg
NC_010468:61381261381263388120070Escherichia coli ATCC 8739, complete genome7e-115422BLASTN svgBLASTP svg
NC_011750:3768692*3768692379303824347Escherichia coli IAI39 chromosome, complete genome7e-115422BLASTN svgBLASTP svg
NC_010658:3014371*3014371303259918229Shigella boydii CDC 3083-94, complete genome4e-113416BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome4e-113416BLASTN svgBLASTP svg
NC_010488:48868488687267123804Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence4e-98367BLASTN svgBLASTP svg
NC_009648:38036223803622385072747106Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-75291BLASTN svgBLASTP svg
NC_015061:15989201598920163040531486Rahnella sp. Y9602 chromosome, complete genome2e-56228BLASTN svgBLASTP svg
NC_020181:51305135130513517631045798Enterobacter aerogenes EA1509E, complete genome2e-53218BLASTN svgBLASTP svg
NC_014837:2458780*2458780248745128672Pantoea sp. At-9b chromosome, complete genome1e-42182BLASTN svgBLASTP svg
NC_004347:30280003028000305021722218Shewanella oneidensis MR-1, complete genome1e-42182BLASTN svgBLASTP svg
NC_014562:16982531698253172164923397Pantoea vagans C9-1 chromosome, complete genome7e-41176BLASTN svgBLASTP svg
NC_010159:1668795*1668795168827719483Yersinia pestis Angola, complete genome4e-39170BLASTN svgBLASTP svg
NC_003143:39874839874842431625569Yersinia pestis CO92, complete genome2e-38168BLASTN svgBLASTP svg
NC_004088:4202247*4202247422568123435Yersinia pestis KIM, complete genome2e-38168BLASTN svgBLASTP svg
NC_005810:43067164306716433058723872Yersinia pestis biovar Microtus str. 91001, complete genome2e-38168BLASTN svgBLASTP svg
NC_008149:31886031886034352424665Yersinia pestis Nepal516, complete genome2e-38168BLASTN svgBLASTP svg
NC_008150:43737224373722439711823397Yersinia pestis Antiqua, complete genome2e-38168BLASTN svgBLASTP svg
NC_009831:20458112045811206913323323Shewanella sediminis HAW-EB3, complete genome1e-36163BLASTN svgBLASTP svg
NC_013282:33896193389619341209922481Cronobacter turicensis, complete genome6e-35157BLASTN svgBLASTP svg
NC_015061:59624759624762407627830Rahnella sp. Y9602 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_015460:41882641882644021921394Gallibacterium anatis UMN179 chromosome, complete genome4e-33151BLASTN svgBLASTP svg
NC_012917:3565268*3565268359123425967Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-31145BLASTN svgBLASTP svg
NC_007946:47797454779745482809648352Escherichia coli UTI89, complete genome2e-31145BLASTN svgBLASTP svg
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome1e-30143BLASTN svgBLASTP svg
NC_020181:51825685182568520953926972Enterobacter aerogenes EA1509E, complete genome4e-27131BLASTN svgBLASTP svg
NC_006155:21168342116834213909922266Yersinia pseudotuberculosis IP 32953, complete genome4e-27131BLASTN svgBLASTP svg
NC_020211:45982174598217463062032404Serratia marcescens WW4, complete genome1e-26129BLASTN svgBLASTP svg
NC_020211:31514583151458317575024293Serratia marcescens WW4, complete genome9e-25123BLASTN svgBLASTP svg
NC_008253:3122148*3122148315923237085Escherichia coli 536, complete genome9e-22113BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_012724:14745414745417238824935Burkholderia glumae BGR1 chromosome 1, complete genome1e-20109BLASTN svgBLASTP svg
NC_015061:31112113111211313800526795Rahnella sp. Y9602 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_003198:44534574453457450773054274Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1489.7BLASTN svgBLASTP svg
NC_007712:31630003163000318759924600Sodalis glossinidius str. 'morsitans', complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007712:19970101997010202024223233Sodalis glossinidius str. 'morsitans', complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006155:2084669*2084669210379619128Yersinia pseudotuberculosis IP 32953, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010498:4072681*4072681409685324173Escherichia coli SMS-3-5, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011740:448000*44800047065722658Escherichia fergusonii ATCC 35469, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013714:1521404*1521404154642725024Bifidobacterium dentium Bd1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014837:37664263766426379523728812Pantoea sp. At-9b chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013508:35930003593000361400721008Edwardsiella tarda EIB202, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012912:1200000*1200000122694026941Dickeya zeae Ech1591, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014562:2871765*2871765290090029136Pantoea vagans C9-1 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,7e-1073.8BLASTN svgBLASTP svg
NC_020260:31280531280533684424040Cronobacter sakazakii Sp291, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013956:35257113525711354815922449Pantoea ananatis LMG 20103 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010694:61498561498564279627812Erwinia tasmaniensis, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010468:49074*490746937320300Escherichia coli ATCC 8739, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012483:3000619*3000619302570125083Acidobacterium capsulatum ATCC 51196, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012483:37315423731542380708575544Acidobacterium capsulatum ATCC 51196, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014837:3739408*3739408376471125304Pantoea sp. At-9b chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018750:33153093315309333886923561Streptomyces venezuelae ATCC 10712, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013508:2870954*2870954288859917646Edwardsiella tarda EIB202, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008253:31613113161311320913747827Escherichia coli 536, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008618:1206157*1206157123086924713Bifidobacterium adolescentis ATCC 15703, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012880:24800002480000249810318104Dickeya dadantii Ech703, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021066:53421275342127536560823482Raoultella ornithinolytica B6, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010943:325739*32573934942023682Stenotrophomonas maltophilia K279a, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010939:405477*40547744742441948Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete7e-0763.9BLASTN svgBLASTP svg
NC_009053:393700*39370041964225943Actinobacillus pleuropneumoniae L20, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004431:27986827986832229542428Escherichia coli CFT073, complete genome3e-0661.9BLASTN svgBLASTP svg