Pre_GI: BLASTP Hits

Some Help

Query: NC_009800:3787320:3798811 Escherichia coli HS, complete genome

Start: 3798811, End: 3800724, Length: 1914

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:3696877:3706974370697437088871914Escherichia coli B str. REL606 chromosome, complete genomePTS system mannitol-specific transporter subunit IIABC01157
NC_011748:4131924:4144171414417141460841914Escherichia coli 55989, complete genomefused mannitol-specific PTS enzymes: IIA components ; IIB components ; IIC components01157
CU928145:4131924:4144171414417141460841914Escherichia coli 55989 chromosome, complete genomefused mannitol-specific PTS enzymes: IIA components ; IIB components ; IIC components01157
NC_011415:4006500:4017340401734040192531914Escherichia coli SE11 chromosome, complete genomePTS system mannitol-specific IIABC components01157
NC_012759:3648500:3658630365863036605431914Escherichia coli BW2952 chromosome, complete genomefused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components01157
NC_012947:126596:1355501355501374631914Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completePTS system, mannitol-specific IIC subunit01157
AP010958:4707712:4709542470954247114551914Escherichia coli O103:H2 str. 12009 DNA, complete genomefused mannitol-specific PTS enzymes: IIA component /IIB component/IIC component01151
CP002185:3964500:3975271397527139771841914Escherichia coli W, complete genomefused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components01151
NC_010468:111504:1206321206321225451914Escherichia coli ATCC 8739, complete genomePTS system, mannitol-specific IIC subunit01151
CP002516:119935:1288891288891308021914Escherichia coli KO11, complete genomePTS system, mannitol-specific IIC subunit01151
NC_009801:4073968:4085443408544340873561914Escherichia coli E24377A, complete genomePTS system, mannitol-specific IIABC component01151
NC_013353:4707712:4709542470954247114551914Escherichia coli O103:H2 str. 12009, complete genomefused mannitol-specific PTS enzymes: IIA component /IIB component/IIC component01151
NC_016902:119935:1288891288891308021914Escherichia coli KO11FL chromosome, complete genomePTS system mannitol-specific transporter subunit IIC01151
NC_010498:3988351:4007925400792540098381914Escherichia coli SMS-3-5, complete genomePTS system, mannitol-specific IIABC component01151
NC_004337:3590323:3738310373831037402231914Shigella flexneri 2a str. 301, complete genomePTS system, mannitol-specific enzyme IIABC components01151
NC_013282:116649:1331691331691350881920Cronobacter turicensis, complete genomePTS system mannitol-specific EIICBA component01057
NC_015224:4473230:4473230447323044750951866Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,PTS system, mannitol-specific IIABC component0910
NC_004603:370320:3703203703203722721953Vibrio parahaemolyticus RIMD 2210633 chromosome I, completePTS system, mannitol-specific IIABC component0797
NC_013416:1748848:1751676175167617535561881Aggregatibacter actinomycetemcomitans D11S-1, complete genomePTS system, mannitol-specific IIC subunit0773
NC_016513:2103958:2105771210577121076511881Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completePTS system mannitol-specific transporter subunit IIC0768
NC_009617:263060:2762622762622776681407Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannitol-specific transporter subunit IIC6e-136484
NC_020995:2636519:2645125264512526470441920Enterococcus casseliflavus EC20, complete genomehypothetical protein7e-123441
NC_020207:1346579:1348175134817513496201446Enterococcus faecium NRRL B-2354, complete genomePTS system, mannitol-specific cryptic IIB, IIC component2e-120433
NC_013172:783097:8049728049728070352064Brachybacterium faecium DSM 4810, complete genomephosphotransferase system, mannitol-specific IIBC component1e-118427
NC_017341:2303005:2303005230300523045431539Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,PTS system mannitol-specific IIBC component6e-117421
NC_002951:2208813:2208813220881322103511539Staphylococcus aureus subsp. aureus COL, complete genomePTS system, mannitol-specific IIBC components6e-117421
NC_015389:616430:6663496663496678241476Coriobacterium glomerans PW2 chromosome, complete genomePTS system D-mannitol-specific IIBC components, Fru family5e-113408
NC_003210:2879906:2884141288414128855471407Listeria monocytogenes EGD-e, complete genomehypothetical protein3e-109396
NC_009004:25988:2649426494283171824Lactococcus lactis subsp. cremoris MG1363, complete genomePTS system, mannitol-specific IIBC component4e-108392
NC_014448:225414:2264922264922279391448Mycoplasma hyorhinis HUB-1 chromosome, complete genome9e-68258
NC_014121:3553809:3554507355450735556371131Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebifunctional fructose-specific PTS IIA/HPr protein4e-28127
NC_010465:3046904:3049554304955430506871134Yersinia pseudotuberculosis YPIII, complete genomephosphocarrier, HPr family4e-28126
NC_005810:1413305:1415955141595514170881134Yersinia pestis biovar Microtus str. 91001, complete genomebifunctional fructose-specific PTS IIA/HPr protein5e-28126
NC_010634:1565788:1581587158158715827201134Yersinia pseudotuberculosis PB1/+, complete genomeHPr family phosphocarrier protein5e-28126
NC_008149:3022970:3025620302562030267531134Yersinia pestis Nepal516, complete genomehypothetical protein5e-28126
NC_010159:1558000:1573109157310915742421134Yersinia pestis Angola, complete genomephosphocarrier, HPr family5e-28126
NC_003143:1441211:1456994145699414581271134Yersinia pestis CO92, complete genomehypothetical protein5e-28126
NC_006155:1567306:1583090158309015842231134Yersinia pseudotuberculosis IP 32953, complete genomePTS system, fructose-specific II component / phosphocarrier p...5e-28126
NC_008150:1147883:1163094116309411642271134Yersinia pestis Antiqua, complete genomehypothetical protein5e-28126
NC_004088:3186954:3189604318960431907371134Yersinia pestis KIM, complete genomePTS system, fructose-specific IIA/fpr component5e-28126
NC_009381:2731965:2734615273461527357481134Yersinia pestis Pestoides F chromosome, complete genomebifunctional PTS system fructose-specific transporter subunit IIA/HPr protein5e-28126
NC_009708:3035798:3038448303844830395811134Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebifunctional PTS system fructose-specific transporter subunit IIA/HPr protein5e-28126
NC_017265:2807302:2809952280995228110851134Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,IIA and HPr components of fructose-specific PTS enzyme5e-28126
NC_017168:4363000:4379062437906243801951134Yersinia pestis A1122 chromosome, complete genomebifunctional PTS system fructose-specific transporter subunit IIA/HPr protein5e-28126
NC_017160:1299733:1302191130219113033241134Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-28126
NC_017154:1454704:1470488147048814716211134Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-28126
NC_014029:1512605:1528380152838015295131134Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-28126
NC_017179:2513804:253439525343952534817423Clostridium difficile BI1, complete genomePTS system mannitol-specific transporter subunit IIA2e-26120
NC_013315:2505792:252638325263832526805423Clostridium difficile CD196 chromosome, complete genomePTS system mannitol-specific transporter subunit IIA2e-26120
NC_013316:2585666:260693926069392607361423Clostridium difficile R20291, complete genomePTS system, mannitol-specific IIa component2e-26120
NC_016513:317197:3400363400363415651530Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completebifunctional PTS system fructose-specific transporter subunit IIA/HPr protein6e-26119
NC_012121:1676367:167840716784071678841435Staphylococcus carnosus subsp. carnosus TM300, complete genomePTS system, mannitol-specific IIA component5e-25116
NC_012526:2483000:2505755250575525082382484Deinococcus deserti VCD115, complete genomeputative phosphoenolpyruvate-protein phosphotransferase2e-23111
NC_009004:25988:303583035830789432Lactococcus lactis subsp. cremoris MG1363, complete genomePTS system, mannitol-specific IIA component7e-23109
NC_002662:30922:329073290733338432Lactococcus lactis subsp. lactis Il1403, complete genomemannitol-specific PTS system IIA component5e-22106
NC_017341:2303005:230672223067222307156435Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2, MtlA_19e-21102
NC_002951:2208813:221253022125302212964435Staphylococcus aureus subsp. aureus COL, complete genomePTS system, mannitol-specific IIA component9e-21102
NC_009617:263060:280258280258280698441Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 22e-20101
NC_005955:173436:1734361734361759492514Bartonella quintana str. Toulouse, complete genomeMultiphosphoryl transfer protein (mtp)1e-1585.5
NC_020829:1068438:1091157109115710940362880Pseudomonas denitrificans ATCC 13867, complete genomemulitfunctional PTS system fructose-like transporter subunit IIA/phosphocarrier protein HPr/phosphoenolpyruvate-protein phosphotransferase2e-1481.6
NC_015224:1914833:192682219268221927253432Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phosphoenolpyruvate-dependent sugar phosphotransferase system, IIA component5e-1376.6
NC_013411:2975364:298726929872692987712444Geobacillus sp. Y412MC61, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN4e-1273.9
NC_014915:2092678:212720021272002127643444Geobacillus sp. Y412MC52 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN4e-1273.9
NC_014306:1286248:130376113037611304192432Erwinia billingiae Eb661, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system, IIa component1e-1172.4
NC_003210:2721559:272315927231592723593435Listeria monocytogenes EGD-e, complete genomehypothetical protein3e-1170.9
NC_012731:2650603:266458026645802665017438Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeascorbate-specific PTS family enzyme IIA component8e-1169.3
NC_011660:2175537:219569621956962196160465Listeria monocytogenes HCC23 chromosome, complete genomeiiabc fructose/xylitol-pts2e-1068.2
NC_009648:1914621:192860019286001929037438Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomePTS family enzyme IIA, mannitol-specific, cryptic3e-1067.8
NC_016845:2691129:270512727051272705564438Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,PTS system protein4e-1067.4
NC_011083:3171171:318477431847743185232459Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,pts system mannitol-specific eiicba component4e-1067
NC_015425:641000:647072647072647518447Clostridium botulinum BKT015925 chromosome, complete genomephosphotransferase system mannitol/fructose-specific IIA domain5e-1066.6
NC_013508:3188978:319213131921313192574444Edwardsiella tarda EIB202, complete genomeputative phosphotransferase enzyme II, A component SgcA6e-1066.6
NC_013850:2685835:269143426914342691871438Klebsiella variicola At-22 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-0965.5
NC_014376:2766326:2772039277203927740752037Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional antiterminator, BglG1e-0965.1
NC_005362:1796696:1806355180635518083401986Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable fructose specific2e-0965.1
NC_007644:3229:145621456215026465Moorella thermoacetica ATCC 39073, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN8e-0962.8
NC_014228:2812000:283020828302082830651444Xenorhabdus nematophila ATCC 19061, complete genomeputative phosphotransferase enzyme II, A component SgcA8e-0962.8
NC_014334:369974:3699743699743720702097Lactobacillus casei str. Zhang chromosome, complete genometranscriptional antiterminator and PtS system component IIA1e-0862.4
NC_014831:2201246:221412422141242214591468Thermaerobacter marianensis DSM 12885 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-0862
NC_015663:4447984:446152744615274461967441Enterobacter aerogenes KCTC 2190 chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN2e-0861.6
NC_013515:347671:372227372227372685459Streptobacillus moniliformis DSM 12112, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-0861.2
NC_012781:4065:1960719607215351929Eubacterium rectale ATCC 33656, complete genomePTS system, fructose-specific, IIABC component2e-0861.2
NC_015391:2449927:245398724539872454439453Carnobacterium sp. 17-4 chromosome, complete genomePTS system mannose-specific EIIBCA component3e-0860.8
NC_020181:969599:975124975124975564441Enterobacter aerogenes EA1509E, complete genomePTS system, IIA component3e-0860.8
NC_014328:2872721:288955228895522889989438Clostridium ljungdahlii ATCC 49587 chromosome, complete genomePTS system fructose/mannose-specific transporter subunit IIA3e-0860.5
NC_015214:1853106:1874088187408818760912004Lactobacillus acidophilus 30SC chromosome, complete genomePTS system, fructose-specific enzyme II5e-0860.1
NC_013364:5083949:511124851112485111712465Escherichia coli O111:H- str. 11128, complete genomePTS system L-ascorbate-specific transporter subunit IIA UlaC5e-0860.1
NC_014334:369974:3873613873613893491989Lactobacillus casei str. Zhang chromosome, complete genomePTS system fructose-specific transporter subunit IIABC5e-0860.1
NC_014650:1410790:1421157142115714230731917Geobacillus sp. Y4.1MC1 chromosome, complete genometranscriptional antiterminator BglG5e-0860.1
NC_016894:377446:3791203791203810301911Acetobacterium woodii DSM 1030 chromosome, complete genomefructose-specific PTS system II components ABC1e-0758.9
NC_004431:279868:307515307515307958444Escherichia coli CFT073, complete genomePTS system, mannitol (Cryptic)-specific IIA component2e-0758.5
NC_015565:2827444:284287628428762843328453Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-0758.5
NC_010468:1816359:182091418209141821372459Escherichia coli ATCC 8739, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN3e-0757.8
NC_019842:2575000:2590378259037825923361959Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,PTS system mannose-specific transporter subunits IIBCA3e-0757.4
NC_009725:2517428:2536355253635525383131959Bacillus amyloliquefaciens FZB42, complete genomeManP3e-0757.4
NC_006510:2044347:2064172206417220662262055Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-0757
NC_003210:2721559:2723786272378627258522067Listeria monocytogenes EGD-e, complete genomehypothetical protein4e-0757
NC_016012:665171:683378683378683806429Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeascorbate-specific phosphotransferase enzyme IIA component4e-0757
NC_012472:5015621:5027811502781150297631953Bacillus cereus 03BB102, complete genomephosphotransferase system6e-0756.6
NC_011969:4945441:4958931495893149608831953Bacillus cereus Q1 chromosome, complete genomepts mannose-specific enzyme iibca component6e-0756.6
NC_000958:73685:9209892098943262229Deinococcus radiodurans R1 plasmid MP1, complete sequencePTS system, multiphosphoryl transfer protein, domains EI, HPr, and fructose5e-0756.6
NC_008600:5005345:5017535501753550195021968Bacillus thuringiensis str. Al Hakam, complete genomephosphotransferase system (PTS) mannose-specific enzyme IIBCA7e-0756.2
NC_016779:4969626:4981803498180349837551953Bacillus cereus F837/76 chromosome, complete genomePTS system mannose-specific transporter subunit IIB7e-0756.2
NC_014377:1400544:141148014114801411953474Thermosediminibacter oceani DSM 16646 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN8e-0756.2
NC_013198:394000:404798404798405247450Lactobacillus rhamnosus GG, complete genomePTS system, mannitol/fructose-specific EIIA component (Ntr-type)1e-0655.8
NC_013517:1529765:154133815413381541787450Sebaldella termitidis ATCC 33386, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-0655.8
NC_014831:786011:789056789056789196141Thermaerobacter marianensis DSM 12885 chromosome, complete genome9e-0755.8
NC_003212:2814737:2814737281473728168032067Listeria innocua Clip11262, complete genomehypothetical protein9e-0755.8
NC_013199:392450:4054264054264073691944Lactobacillus rhamnosus Lc 705, complete genomePTS system, fructose-specific IIABC component (fruA-2)2e-0655.1
NC_014976:3469395:3485323348532334872751953Bacillus subtilis BSn5 chromosome, complete genomePTS mannose-specific transporter subunit IIBCA2e-0655.1
NC_003909:3483244:3494145349414534960011857Bacillus cereus ATCC 10987, complete genomePTS system, fructose-specific IIABC component2e-0654.7
NC_017195:1230485:1249720124972012516721953Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completephosphotransferase system2e-0654.7
NC_008555:2628858:2628858262885826309242067Listeria welshimeri serovar 6b str. SLCC5334, complete genomePTS system, IIA component, putative3e-0654.3
NC_020244:1264500:1275845127584512777971953Bacillus subtilis XF-1, complete genomephosphotransferase system (PTS) mannose-specific enzyme IIBCA component3e-0654.3
NC_009617:3184924:318525431852543185703450Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS transporter subunit IIA-like nitrogen-regulatory protein PtsN3e-0654.3
NC_011773:3547507:3558350355835035602061857Bacillus cereus AH820 chromosome, complete genomePTS system fructose-specific transporter subunit IIABC6e-0653.1
NC_012581:709234:7175947175947194741881Bacillus anthracis str. CDC 684 chromosome, complete genomePTS system fructose-specific transporter subunit IIABC7e-0653.1
NC_013956:2592378:2594311259431125962181908Pantoea ananatis LMG 20103 chromosome, complete genomeLicR7e-0652.8
NC_014150:2055907:207265820726582073092435Brachyspira murdochii DSM 12563 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN8e-0652.8
NC_017243:517684:534518534518534952435Brachyspira intermedia PWS/A chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN9e-0652.8
NC_014335:3461115:3471548347154834732601713Bacillus cereus biovar anthracis str. CI chromosome, completePTS fructose-specific enzyme IIBC component9e-0652.4