Pre_GI: BLASTP Hits

Some Help

Query: NC_009800:349592:372935 Escherichia coli HS, complete genome

Start: 372935, End: 374362, Length: 1428

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:364000:4068324068324082591428Escherichia coli CFT073, complete genomePutative electron transport protein ykgF0992
NC_011415:351810:3564203564203578471428Escherichia coli SE11 chromosome, complete genomehypothetical protein0991
NC_008253:334467:3990003990004004271428Escherichia coli 536, complete genomeputative electron transport protein YkgF0991
NC_012947:3487392:3488991348899134904181428Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeiron-sulfur cluster binding protein0989
AC_000091:303719:3215623215623229891428Escherichia coli W3110 DNA, complete genomepredicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain0989
NC_010473:279948:2971122971122985391428Escherichia coli str. K-12 substr. DH10B, complete genomepredicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain0989
NC_000913:303719:3215623215623229891428Escherichia coli K12, complete genomepredicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain0989
NC_007946:289425:3423053423053437321428Escherichia coli UTI89, complete genomeputative electron transport protein YkgF0986
NC_008563:318993:3440223440223453231302Escherichia coli APEC O1, complete genomehypothetical protein0866
NC_013508:343617:3717243717243731451422Edwardsiella tarda EIB202, complete genomeputative electron transport protein YkgF0837
NC_015566:1206500:1227675122767512290961422Serratia sp. AS12 chromosome, complete genomeiron-sulfur cluster binding protein0829
NC_015567:1206727:1227860122786012292811422Serratia sp. AS9 chromosome, complete genomeiron-sulfur cluster binding protein0829
NC_004193:375416:3957243957243971601437Oceanobacillus iheyensis HTE831, complete genomeiron-sulfur protein3e-143508
NC_018720:417500:4327964327964343011506Bifidobacterium asteroides PRL2011 chromosome, complete genomeiron-sulfur cluster binding protein8e-129460
NC_015930:1397524:1409610140961014110821473Lactococcus garvieae ATCC 49156, complete genomeiron-sulfur cluster binding protein2e-122439
NC_013205:747502:7631167631167645341419Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,iron-sulfur cluster binding protein8e-120431
NC_014622:2477019:2489967248996724914871521Paenibacillus polymyxa SC2 chromosome, complete genomeiron-sulfur cluster binding protein9e-119427
NC_017167:674511:6944636944636958811419Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1iron-sulfur cluster binding protein1e-115416
NC_004129:926479:9427539427539442071455Pseudomonas fluorescens Pf-5, complete genomeiron-sulfur cluster binding protein1e-98360
NC_009434:3611738:3612556361255636140161461Pseudomonas stutzeri A1501, complete genomeiron-sulphur protein1e-98360
NC_013235:3913000:3913644391364439151491506Nakamurella multipartita DSM 44233, complete genomeiron-sulfur cluster binding protein2e-97357
NC_014329:844622:8773368773368788801545Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein2e-96353
NC_016932:832748:8654488654488669921545Corynebacterium pseudotuberculosis 316 chromosome, complete genomeLactate utilization protein B2e-96353
NC_017031:863093:8771778771778787211545Corynebacterium pseudotuberculosis P54B96 chromosome, completeLactate utilization protein B2e-96353
NC_017300:863898:8772328772328787761545Corynebacterium pseudotuberculosis 1002 chromosome, completeLactate utilization protein B2e-96353
NC_017301:863500:8769548769548784981545Corynebacterium pseudotuberculosis C231 chromosome, completeLactate utilization protein B2e-96353
NC_017303:863060:8771478771478786911545Corynebacterium pseudotuberculosis I19 chromosome, complete genomeLactate utilization protein B2e-96353
NC_017305:863072:8771598771598787031545Corynebacterium pseudotuberculosis PAT10 chromosome, completeLactate utilization protein B2e-96353
NC_016781:844613:8773278773278788441518Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeLactate utilization protein B3e-96352
NC_017317:944218:9565939565939581371545Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein6e-96351
NC_015683:947048:9594249594249609681545Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein6e-96351
NC_014752:1363562:1365036136503613664901455Neisseria lactamica ST-640, complete genomeiron-sulphur protein7e-95348
NC_008767:1363288:1366452136645213679061455Neisseria meningitidis FAM18, complete genomeconserved hypothetical iron-sulphur protein5e-95348
NC_007492:857428:8832158832158846691455Pseudomonas fluorescens PfO-1, complete genomeIron-sulfur cluster binding protein8e-95347
NC_015957:3342169:3342954334295433444561503Streptomyces violaceusniger Tu 4113 chromosome, complete genomeiron-sulfur cluster binding protein2e-94346
NC_014643:535708:5495465495465511711626Rothia dentocariosa ATCC 17931 chromosome, complete genomeiron-sulfur cluster-binding protein2e-94346
NC_013235:4091185:4091931409193140934151485Nakamurella multipartita DSM 44233, complete genomeiron-sulfur cluster binding protein1e-92340
NC_015277:6213304:1425614256156441389Sphingobacterium sp. 21 chromosome, complete genomeLactate utilization protein B/C2e-92340
NC_015859:370500:3729903729903744801491Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein9e-92337
NC_015703:3637312:3639438363943836408021365Runella slithyformis DSM 19594 chromosome, complete genomeLactate utilization protein B/C7e-89328
NC_017192:88940:1089571089571103361380Arcobacter sp. L, complete genomeputative iron-sulfur cluster binding protein9e-89327
NC_011000:2732330:2750449275044927518221374Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative iron-sulphur cluster binding electron transport protein2e-87323
NC_013501:777947:8023318023318037311401Rhodothermus marinus DSM 4252, complete genomeprotein of unknown function DUF1622e-87323
NC_013355:1332263:1340858134085813423001443Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeprotein of unknown function DUF1629e-86317
NC_015388:2434922:2460496246049624618631368Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeLactate utilization protein B/C6e-77288
NC_013223:1188500:1213128121312812152812154Desulfohalobium retbaense DSM 5692, complete genomeprotein of unknown function DUF1624e-74278
NC_007519:3240864:3240864324086432430052142Desulfovibrio alaskensis G20 chromosome, complete genomeiron-sulfur cluster-binding protein2e-70266
NC_015318:249445:2663582663582684122055Hippea maritima DSM 10411 chromosome, complete genomeLactate utilization protein B/C5e-56219
NC_008818:956231:9562319562319574481218Hyperthermus butylicus DSM 5456, complete genomeuniversally conserved protein3e-54213
NC_008701:1226797:1226797122679712279571161Pyrobaculum islandicum DSM 4184, complete genomeprotein of unknown function DUF1621e-52207
NC_013926:920279:9488649488649501441281Aciduliprofundum boonei T469 chromosome, complete genomeprotein of unknown function DUF1622e-52207
NC_016885:1614427:1625228162522816263971170Pyrobaculum oguniense TE7 chromosome, complete genomehypothetical protein2e-52207
NC_019942:987134:1025644102564410269271284Aciduliprofundum sp. MAR08-339, complete genomehypothetical protein2e-52207
NC_003364:756813:7616947616947628331140Pyrobaculum aerophilum str. IM2, complete genomehypothetical protein1e-51204
NC_009376:420000:4302264302264313741149Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomehypothetical protein1e-49197
NC_017276:2481083:2500916250091625039183003Sulfolobus islandicus REY15A chromosome, complete genomeFAD linked oxidase domain-containing protein5e-0859.7
NC_002754:1968668:1986907198690719899093003Sulfolobus solfataricus P2, complete genomeDehydrogenase, putative1e-0758.2
NC_017275:2615814:2633123263312326361253003Sulfolobus islandicus HVE10/4 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-0757.8
NC_013769:2685000:2700105270010527031073003Sulfolobus islandicus L.D.8.5 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-0757.8
NC_012623:2774910:2790237279023727932393003Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-0757.8
NC_012589:2698556:2714345271434527173473003Sulfolobus islandicus L.S.2.15, complete genomeFAD linked oxidase domain protein2e-0757.8
NC_012632:2654200:2670471267047126734733003Sulfolobus islandicus M.16.27 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-0757.8
NC_012726:2549813:2564717256471725677193003Sulfolobus islandicus M.16.4 chromosome, complete genomeFAD linked oxidase domain-containing protein2e-0757.8