Pre_GI: BLASTP Hits

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Query: NC_009800:3224575:3235237 Escherichia coli HS, complete genome

Start: 3235237, End: 3235437, Length: 201

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:693703:701404701404701604201Escherichia coli KO11FL chromosome, complete genomeGlycogen synthesis protein1e-33141
NC_010473:3273882:328750632875063287706201Escherichia coli str. K-12 substr. DH10B, complete genomepredicted glycogen synthesis protein1e-33141
NC_011748:3529930:354049135404913540691201Escherichia coli 55989, complete genomeglycogen synthesis protein GlgS1e-33141
NC_011750:3683760:369604836960483696248201Escherichia coli IAI39 chromosome, complete genomeglycogen synthesis protein GlgS1e-33141
AP010958:3787991:380111138011113801311201Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted glycogen synthesis protein1e-33141
NC_009801:3511444:352142435214243521624201Escherichia coli E24377A, complete genomeglycogen synthesis protein GlgS1e-33141
AC_000091:3180275:319039531903953190595201Escherichia coli W3110 DNA, complete genomepredicted glycogen synthesis protein1e-33141
CP002516:693703:701404701404701604201Escherichia coli KO11, complete genomeGlycogen synthesis protein1e-33141
NC_000913:3176000:318976131897613189961201Escherichia coli K12, complete genomeglycogen synthesis protein GlgS1e-33141
CU928160:3263248:327322832732283273428201Escherichia coli IAI1 chromosome, complete genomeputative glycogen synthesis protein1e-33141
CP002185:3393813:340447134044713404671201Escherichia coli W, complete genomepredicted glycogen synthesis protein1e-33141
NC_010468:694943:703967703967704167201Escherichia coli ATCC 8739, complete genomeGlycogen synthesis protein1e-33141
CU928145:3529930:354049135404913540691201Escherichia coli 55989 chromosome, complete genomeputative glycogen synthesis protein1e-33141
NC_016822:3485631:349907234990723499272201Shigella sonnei 53G, complete genomeglycogen synthesis protein GlgS1e-33141
NC_013364:3840000:385236738523673852567201Escherichia coli O111:H- str. 11128, complete genomeputative glycogen synthesis protein1e-33141
NC_013361:4102894:411355241135524113752201Escherichia coli O26:H11 str. 11368 chromosome, complete genomeglycogen synthesis protein GlgS1e-33141
NC_013353:3787991:380111138011113801311201Escherichia coli O103:H2 str. 12009, complete genomeglycogen synthesis protein1e-33141
NC_012967:3113768:312457531245753124775201Escherichia coli B str. REL606 chromosome, complete genomeglycogen synthesis protein GlgS1e-33141
NC_012947:708064:715764715764715964201Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeglycogen synthesis protein GlgS1e-33141
NC_012759:3063285:307690930769093077109201Escherichia coli BW2952 chromosome, complete genomeglycogen synthesis protein GlgS1e-33141
NC_011741:3263248:327322832732283273428201Escherichia coli IAI1 chromosome, complete genomeglycogen synthesis protein GlgS1e-33141
NC_011415:3443851:345450834545083454708201Escherichia coli SE11 chromosome, complete genomeglycogen synthesis protein GlgS1e-33141
NC_011745:3627438:364119336411933641393201Escherichia coli ED1a chromosome, complete genomeglycogen synthesis protein GlgS3e-33140
NC_016612:627118:639270639270639479210Klebsiella oxytoca KCTC 1686 chromosome, complete genomeglycogen synthesis protein GlgS1e-1582