Pre_GI: BLASTP Hits

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Query: NC_009800:320115:332857 Escherichia coli HS, complete genome

Start: 332857, End: 333174, Length: 318

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:4170369:418204941820494182369321Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-47186
NC_009800:2049346:206290020629002063292393Escherichia coli HS, complete genomehypothetical protein4e-28123
NC_015968:3277217:328520532852053285525321Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein4e-24109
NC_015968:2845751:286317928631792863496318Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein4e-23106
NC_014121:1357339:137024413702441370564321Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein6e-23105
NC_006905:1342474:135048113504811350789309Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-21102
NC_014306:3524980:353372535337253534045321Erwinia billingiae Eb661, complete genomeputative prophage repressor9e-1682
NC_014838:254322:263187263187263510324Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein6e-1476.3
NC_014121:1682638:169113516911351691320186Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-0961.6
NC_006856:95830:100863100863101300438Salmonella enterica subsp. enterica serovar Choleraesuis strImpA7e-0752.8
NC_007941:11319:558295582956266438Escherichia coli UTI89 plasmid pUTI89, complete sequenceUV protection and mutation protein1e-0652
NC_009436:2056000:206974720697472070181435Enterobacter sp. 638, complete genomeprophage repressor1e-0652
NC_013850:1887556:193656619365661936856291Klebsiella variicola At-22 chromosome, complete genomehypothetical protein2e-0651.2
NC_014837:1570500:1585521158552115866121092Pantoea sp. At-9b chromosome, complete genomeTerminase3e-0650.8
NC_015663:4488058:450077545007754501065291Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein5e-0650.1
NC_015663:4735808:474481047448104745100291Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein5e-0650.1