Pre_GI: BLASTP Hits

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Query: NC_009800:320115:327868 Escherichia coli HS, complete genome

Start: 327868, End: 328461, Length: 594

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011748:2655989:267148226714822672261780Escherichia coli 55989, complete genomehypothetical protein from phage8e-91332
CU928145:2655989:267148226714822672261780Escherichia coli 55989 chromosome, complete genomehypothetical protein from phage8e-91332
NC_015761:1017301:101730110173011018047747Salmonella bongori NCTC 12419, complete genomephage-like protein4e-62237
NC_007712:2897000:289757528975752898336762Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-60231
NC_013353:2911741:291876929187692919512744Escherichia coli O103:H2 str. 12009, complete genomeantirepressor protein4e-59227
AP010958:2911741:291876929187692919512744Escherichia coli O103:H2 str. 12009 DNA, complete genomeantirepressor protein4e-59227
NC_011094:638552:655441655441655761321Salmonella enterica subsp. enterica serovar Schwarzengrund strAnt23e-1271.6