Pre_GI: BLASTP Hits

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Query: NC_009800:320115:320115 Escherichia coli HS, complete genome

Start: 320115, End: 321068, Length: 954

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3254000:327447232744723275320849Escherichia coli O26:H11 str. 11368 chromosome, complete genomehead DNA stabilization protein1e-132473
NC_016902:1475521:147693914769391477787849Escherichia coli KO11FL chromosome, complete genomeTropomyosin4e-131467
CP002185:2608000:262807026280702628918849Escherichia coli W, complete genomehypothetical protein4e-131467
CP002516:1475521:147693914769391477787849Escherichia coli KO11, complete genomeTropomyosin4e-131467
NC_011740:2072173:208930020893002090148849Escherichia fergusonii ATCC 35469, complete genomePackaged DNA stabilization protein gp264e-124444
CU928145:2655989:267912826791282679976849Escherichia coli 55989 chromosome, complete genomePackaged DNA stabilization protein gp263e-124444
NC_011748:2655989:267912826791282679976849Escherichia coli 55989, complete genomePackaged DNA stabilization protein gp263e-124444
NC_017328:335160:336578336578337426849Shigella flexneri 2002017 chromosome, complete genomeputative Chromosome segregation ATPase2e-122439
NC_013941:2928000:293782229378222938391570Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-80298
NC_013008:3231414:325574332557433256312570Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-80298
NC_002655:3260500:326671232667123267281570Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-80298
NC_011353:3276734:330087233008723301402531Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein9e-80296
NC_016860:397138:399020399020399721702Salmonella enterica subsp. enterica serovar Typhimurium strgp268e-41167
NC_002695:3189425:319675631967563197043288Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-41167
NC_011205:645591:647013647013647714702Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gp266e-40164
NC_011083:403022:404444404444405145702Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,head completion protein1e-39163
NC_010067:2529750:256914325691432569844702Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-39162
NC_013364:2612822:262794726279472628654708Escherichia coli O111:H- str. 11128, complete genomeputative head DNA stabilization protein3e-35149
NC_008563:2565876:258417025841702584871702Escherichia coli APEC O1, complete genomeputative DNA stabilization protein3e-34145
NC_007946:2593500:261094426109442611645702Escherichia coli UTI89, complete genomeDNA stabilization protein3e-34145
NC_011742:2489000:250726725072672508070804Escherichia coli S88 chromosome, complete genomePackaged DNA stabilization protein from phage7e-34144
NC_012125:1360593:136395013639501364588639Salmonella enterica subsp. enterica serovar Paratyphi C strainPackaged DNA stabilization protein gp262e-30133
NC_006905:401154:402576402576403214639Salmonella enterica subsp. enterica serovar Choleraesuis strPackaged DNA stabilization protein gp262e-29130
NC_020418:3102460:311852731185273119270744Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-21102
NC_019792:3027515:3045321304532130484223102Natronobacterium gregoryi SP2 chromosome, complete genomehypothetical protein1e-0757.8