Pre_GI: BLASTP Hits

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Query: NC_009800:289000:302472 Escherichia coli HS, complete genome

Start: 302472, End: 302768, Length: 297

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:2645438:265155626515562651852297Escherichia coli O111:H- str. 11128, complete genomeputative phage regulatory protein CII4e-49192
NC_013941:3300000:330197933019793302275297Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCII protein3e-48190
NC_013361:3112023:312917331291733129469297Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage regulatory protein CII3e-48190
AP010958:5361207:537804653780465378342297Escherichia coli O103:H2 str. 12009 DNA, complete genomephage regulatory protein CII7e-47185
NC_002655:1332961:134405513440551344351297Escherichia coli O157:H7 EDL933, complete genomeputative regulatory protein CII of bacteriophage BP-933W7e-47185
NC_013353:5361207:537804653780465378342297Escherichia coli O103:H2 str. 12009, complete genomephage regulatory protein CII7e-47185
NC_013364:1183000:119531211953121195608297Escherichia coli O111:H- str. 11128, complete genomeputative phage regulatory protein7e-47185
NC_013361:1558423:157164615716461571942297Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage regulatory protein CII5e-46182
NC_011601:2614691:261888226188822619178297Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein1e-45181
NC_012947:3015985:302095330209533021252300Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeCII family protein9e-45178
NC_011601:1039500:105289810528981053194297Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein4e-44176
NC_011353:3276734:328109632810963281392297Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage CII protein3e-44176
NC_013008:3231414:323596732359673236263297Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulatory protein CII of bacteriophage BP-933W3e-44176
NC_011740:2072173:210936321093632109659297Escherichia fergusonii ATCC 35469, complete genomeRegulatory protein CII from phage origin4e-43172
NC_017328:303987:318738318738319034297Shigella flexneri 2002017 chromosome, complete genomeputative regulatory protein CII of bacteriophage9e-43171
NC_008563:1175035:118879711887971189093297Escherichia coli APEC O1, complete genomeputative regulatory protein CII of bacteriophage7e-42169
NC_007946:1239278:125141012514101251706297Escherichia coli UTI89, complete genomeputative regulatory protein CII of bacteriophage7e-42169
NC_004431:1401681:141356214135621413858297Escherichia coli CFT073, complete genomePutative Regulatory protein CII of bacteriophage7e-42169
NC_011742:1177946:119238611923861192682297Escherichia coli S88 chromosome, complete genomeRegulatory protein CII from phage origin7e-42169
NC_011751:1405381:142031414203141420613300Escherichia coli UMN026 chromosome, complete genomeregulatory protein CII from phage origin8e-42168
NC_013941:975353:990356990356990655300Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeregulatory protein CII9e-42168
NC_011601:717072:731767731767732066300Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein2e-39160
NC_013282:1200993:121548112154811215762282Cronobacter turicensis, complete genomehypothetical protein6e-39159