Pre_GI: BLASTP Hits

Some Help

Query: NC_009800:2889928:2911151 Escherichia coli HS, complete genome

Start: 2911151, End: 2911411, Length: 261

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:1029471:102922010292201029480261Escherichia coli ATCC 8739, complete genomehypothetical protein2e-42170
NC_012759:2757826:277775327777532778013261Escherichia coli BW2952 chromosome, complete genomeputative 4Fe-4S cluster-containing protein6e-42169
NC_010473:2963951:298448329844832984743261Escherichia coli str. K-12 substr. DH10B, complete genomepredicted 4Fe-4S cluster-containing protein6e-42169
AC_000091:2872000:289257528925752892835261Escherichia coli W3110 DNA, complete genomepredicted 4Fe-4S cluster-containing protein6e-42169
NC_000913:2873443:289194128919412892201261Escherichia coli K12, complete genomepredicted 4Fe-4S cluster-containing protein6e-42169
NC_009901:4899535:490937549093754909662288Shewanella pealeana ATCC 700345, complete genomeputative ferredoxin1e-1891.7
NC_012880:1585255:160474616047461605039294Dickeya dadantii Ech703, complete genomeferredoxin-like protein2e-1891.3
NC_007907:4859735:488300248830024883289288Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-1682.4
NC_013520:120214:140668140668140946279Veillonella parvula DSM 2008, complete genomeputative ferredoxin7e-1682.4
NC_021171:4588792:459628845962884596572285Bacillus sp. 1NLA3E, complete genomehypothetical protein7e-1475.9
NC_015738:1925997:192614419261441926440297Eggerthella sp. YY7918, complete genomeferredoxin-like protein3e-1373.9
NC_011420:3822765:382765338276533827931279Rhodospirillum centenum SW, complete genomeferredoxin-like protein, FixX9e-1268.9
NC_011368:678291:692701692701692997297Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,7e-1165.9
NC_011894:4066926:408467240846724084956285Methylobacterium nodulans ORS 2060, complete genomeferredoxin-like protein2e-1064.3
NC_008554:4781500:478418647841864784473288Syntrophobacter fumaroxidans MPOB, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein6e-1062.8
NC_019791:1272850:131000813100081310319312Caldisphaera lagunensis DSM 15908 chromosome, complete genomeferredoxin-like protein1e-0962
NC_004463:1898648:193478819347881935084297Bradyrhizobium japonicum USDA 110, complete genomeprobable ferredoxin5e-0960.1
NC_017249:8283701:831940883194088319704297Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-0960.1
NC_010529:296500:323613323613323912300Cupriavidus taiwanensis plasmid pRALTA, complete sequenceferredoxin-like protein3e-0857
NC_003106:1786000:179134017913401791621282Sulfolobus tokodaii str. 7, complete genomehypothetical ferredoxin1e-0755.5
NC_014218:1485568:149215614921561492452297Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomehypothetical protein2e-0754.3
NC_016511:2321999:233424523342452334547303Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeFerredoxin-like protein fixX5e-0753.1
NC_016512:2322598:233358723335872333889303Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeFerredoxin-like protein fixX5e-0753.1
NC_016516:2314115:232510323251032325405303Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeFerredoxin-like protein fixX5e-0753.1
NC_012588:2297497:230250223025022302789288Sulfolobus islandicus M.14.25 chromosome, complete genome4Fe-4S ferredoxin3e-0650.8
NC_012622:2376405:238360923836092383896288Sulfolobus islandicus Y.G.57.14 chromosome, complete genome4Fe-4S ferredoxin3e-0650.8
NC_012623:231603:242768242768243055288Sulfolobus islandicus Y.N.15.51 chromosome, complete genome4Fe-4S ferredoxin3e-0650.8
NC_012632:2390831:239583623958362396123288Sulfolobus islandicus M.16.27 chromosome, complete genome4Fe-4S ferredoxin3e-0650.8
NC_012726:2287880:229288522928852293172288Sulfolobus islandicus M.16.4 chromosome, complete genome4Fe-4S ferredoxin3e-0650.8
NC_013769:2405248:241567624156762415963288Sulfolobus islandicus L.D.8.5 chromosome, complete genome4Fe-4S ferredoxin3e-0650.8
NC_017275:2327479:233495323349532335240288Sulfolobus islandicus HVE10/4 chromosome, complete genome4Fe-4S ferredoxin3e-0650.8
NC_017276:2283933:229786122978612298148288Sulfolobus islandicus REY15A chromosome, complete genome4Fe-4S ferredoxin3e-0650.8
NC_012589:2426242:243286224328622433149288Sulfolobus islandicus L.S.2.15, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein3e-0650.8