Pre_GI: BLASTP Hits

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Query: NC_009800:2889928:2909889 Escherichia coli HS, complete genome

Start: 2909889, End: 2911160, Length: 1272

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012759:2757826:2776491277649127777621272Escherichia coli BW2952 chromosome, complete genomeputative oxidoreductase with FAD/NAD(P)-binding domain0793
NC_010473:2963951:2983221298322129844921272Escherichia coli str. K-12 substr. DH10B, complete genomepredicted oxidoreductase with FAD/NAD(P)-binding domain0793
AC_000091:2872000:2891313289131328925841272Escherichia coli W3110 DNA, complete genomepredicted oxidoreductase, FAD/NAD(P)-binding domain0793
NC_000913:2873443:2890679289067928919501272Escherichia coli K12, complete genomepredicted oxidoreductase with FAD/NAD(P)-binding domain0793
NC_010468:1029471:1029471102947110307421272Escherichia coli ATCC 8739, complete genomeElectron-transferring-flavoprotein dehydrogenase0790
NC_012880:1585255:1603460160346016047491290Dickeya dadantii Ech703, complete genomeElectron-transferring-flavoprotein dehydrogenase3e-84312
NC_007907:4859735:4883286488328648845781293Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-84311
NC_013520:120214:1393641393641406711308Veillonella parvula DSM 2008, complete genomeFAD dependent oxidoreductase7e-76284
NC_009901:4899535:4908089490808949093781290Shewanella pealeana ATCC 700345, complete genomeFAD dependent oxidoreductase2e-75283
NC_021171:4588792:4596569459656945978581290Bacillus sp. 1NLA3E, complete genomeFAD dependent oxidoreductase8e-75281
NC_015172:1120000:1129755112975511310381284Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeElectron-transferring-flavoprotein dehydrogenase4e-67255
NC_015738:1925997:1926437192643719277321296Eggerthella sp. YY7918, complete genomehypothetical protein2e-66253
NC_008554:4781500:4784470478447047857651296Syntrophobacter fumaroxidans MPOB, complete genomeFAD dependent oxidoreductase9e-66251
NC_014218:1485568:1492452149245214937531302Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeElectron-transferring-flavoproteindehydrogenase2e-61236
NC_011420:3822765:3826322382632238276231302Rhodospirillum centenum SW, complete genomenitrogen fixation protein, FixC2e-60233
NC_014039:2320307:2331615233161523329851371Propionibacterium acnes SK137 chromosome, complete genomeFAD dependent oxidoreductase2e-59230
NC_006085:2384892:2396185239618523975341350Propionibacterium acnes KPA171202, complete genomeputative electron transfer flavoprotein-quinone oxidoreductase (FixC protein)2e-59229
NC_016511:2321999:2334547233454723359171371Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeFAD dependent oxidoreductase7e-59228
NC_016512:2322598:2333889233388923352591371Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeFAD dependent oxidoreductase7e-59228
NC_016516:2314115:2325405232540523267751371Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeFAD dependent oxidoreductase7e-59228
NC_015738:1971211:1983315198331519846131299Eggerthella sp. YY7918, complete genomedehydrogenase2e-58227
NC_003364:402268:4022684022684035421275Pyrobaculum aerophilum str. IM2, complete genomeelectron transfer flavoprotein-quinone oxidoreductase4e-56219
NC_016645:1838405:1850090185009018513641275Pyrobaculum sp. 1860 chromosome, complete genomeelectron transfer flavoprotein-quinone oxidoreductase4e-56219
NC_010529:296500:3239093239093252191311Cupriavidus taiwanensis plasmid pRALTA, complete sequenceElectron-transferring-flavoprotein dehydrogenase1e-54214
NC_016885:2091918:2166881216688121681551275Pyrobaculum oguniense TE7 chromosome, complete genomeDehydrogenases (flavoproteins)3e-52206
NC_009376:2102536:2117561211756121188351275Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeFAD dependent oxidoreductase1e-51203
NC_016593:956839:977473977473978387915Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeelectron transfer flavoprotein-quinone oxidoreductase2e-50199
NC_019791:1272850:1310316131031613116261311Caldisphaera lagunensis DSM 15908 chromosome, complete genomeflavin-dependent dehydrogenase7e-50198
NC_017249:8283701:8319743831974383210501308Bradyrhizobium japonicum USDA 6, complete genomeflavoprotein1e-49197
NC_004463:1898648:1933442193344219347491308Bradyrhizobium japonicum USDA 110, complete genomeflavoprotein1e-49197
NC_011368:678291:6930096930096943161308Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,electron-transferring-flavoprotein dehydrogenase6e-49195
NC_011894:4066926:4084999408499940863061308Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase5e-48192
NC_012726:2338500:2346270234627023474931224Sulfolobus islandicus M.16.4 chromosome, complete genomeFAD dependent oxidoreductase2e-42173
NC_012623:160224:1602241602241614471224Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeFAD dependent oxidoreductase3e-42172
NC_017276:2240069:2240069224006922412921224Sulfolobus islandicus REY15A chromosome, complete genomeFAD dependent oxidoreductase6e-42172
NC_003106:1809137:1811978181197818131981221Sulfolobus tokodaii str. 7, complete genomehypothetical fixC protein1e-41171
NC_011899:12699:1568015680168461167Halothermothrix orenii H 168, complete genomeElectron-transferring-flavoprotein dehydrogenase7e-34145
NC_003106:1786000:1791618179161817927721155Sulfolobus tokodaii str. 7, complete genomehypothetical fixC protein5e-25115
NC_009328:814530:858883858883859494612Geobacillus thermodenitrificans NG80-2 chromosome, complete genome1e-23111
NC_013769:2405248:2415960241596024171471188Sulfolobus islandicus L.D.8.5 chromosome, complete genomeFAD dependent oxidoreductase8e-22105
NC_012589:2426242:2433146243314624343331188Sulfolobus islandicus L.S.2.15, complete genomeFAD dependent oxidoreductase1e-21104
NC_012623:231603:2415842415842427711188Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeFAD dependent oxidoreductase2e-21104
NC_012622:2376405:2383893238389323850801188Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeFAD dependent oxidoreductase2e-21104
NC_017276:2283933:2296677229667722978641188Sulfolobus islandicus REY15A chromosome, complete genomeFAD dependent oxidoreductase2e-21103
NC_012588:2297497:2302786230278623039731188Sulfolobus islandicus M.14.25 chromosome, complete genomeFAD dependent oxidoreductase2e-21103
NC_012632:2390831:2396120239612023973071188Sulfolobus islandicus M.16.27 chromosome, complete genomeFAD dependent oxidoreductase2e-21103
NC_012726:2287880:2293169229316922943561188Sulfolobus islandicus M.16.4 chromosome, complete genomeFAD dependent oxidoreductase2e-21103
NC_017275:2327479:2335237233523723364241188Sulfolobus islandicus HVE10/4 chromosome, complete genomeFAD dependent oxidoreductase2e-21103
NC_006526:1202000:1203986120398612056411656Zymomonas mobilis subsp. mobilis ZM4, complete genomeelectrotransfer ubiquinone oxidoreductase4e-2099.4
NC_018145:147759:1620561620561637021647Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeelectron-transferring-flavoprotein dehydrogenase1e-1997.8
NC_009328:814530:860771860771861529759Geobacillus thermodenitrificans NG80-2 chromosome, complete genome2e-1997.1
NC_011080:924326:9346549346549363391686Salmonella enterica subsp. enterica serovar Newport str. SL254,electron transfer flavoprotein-ubiquinone oxidoreductase3e-1997.1
NC_006905:946418:9567409567409584251686Salmonella enterica subsp. enterica serovar Choleraesuis strputative dehydrogenase (flavoproteins)3e-1996.7
NC_010102:2178594:2186304218630421879891686Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1996.7
NC_011094:973140:9834629834629851471686Salmonella enterica subsp. enterica serovar Schwarzengrund strelectron transfer flavoprotein-ubiquinone oxidoreductase3e-1996.7
NC_011294:878896:8892288892288909131686Salmonella enterica subsp. enterica serovar Enteritidis strflavoprotein3e-1996.7
NC_011083:967260:9775889775889792731686Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,electron transfer flavoprotein-ubiquinone oxidoreductase3e-1996.7
NC_003197:920000:9303329303329320171686Salmonella typhimurium LT2, complete genomeputative dehydrogenase3e-1996.7
NC_016810:919266:9295939295939312781686Salmonella enterica subsp. enterica serovar Typhimurium strputative flavoprotein3e-1996.7
NC_016856:921057:9313849313849330691686Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative dehydrogenase3e-1996.7
NC_016857:919266:9295939295939312781686Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative dehydrogenase3e-1996.7
NC_016860:959609:9699369699369716211686Salmonella enterica subsp. enterica serovar Typhimurium strelectron transfer flavoprotein-ubiquinone oxidoreductase3e-1996.7
NC_016863:920346:9306739306739323581686Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative dehydrogenase3e-1996.7
NC_011274:896802:9071359071359088201686Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91flavoprotein3e-1996.3
NC_016831:2108557:2116264211626421179491686Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative flavoprotein3e-1996.3
NC_011205:944125:9544579544579561421686Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853electron transfer flavoprotein-ubiquinone oxidoreductase4e-1995.9
NC_018643:807405:8136068136068152251620Alpha proteobacterium HIMB5 chromosome, complete genomeFAD dependent oxidoreductase,Electron transfer flavoprotein-ubiquinone oxidoreductase2e-1893.6
NC_010067:2488141:2497765249776524994501686Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1791.7
NC_014541:4167916:4189545418954541911791635Ferrimonas balearica DSM 9799 chromosome, complete genomeElectron-transferring-flavoproteindehydrogenase1e-1790.9
NC_002946:1342857:1358282135828213600901809Neisseria gonorrhoeae FA 1090, complete genomeputative electron transfer flavoprotein-ubiquinone oxidoreductase1e-1790.9
NC_017513:548882:5520415520415537021662Neisseria meningitidis G2136 chromosome, complete genomeelectron-transferring-flavoprotein dehydrogenase4e-1789.7
NC_003116:755666:7556667556667574231758Neisseria meningitidis Z2491, complete genomeelectron transfer flavoprotein-ubiquinone oxidoreductase3e-1789.7
NC_017512:526892:5268925268925286491758Neisseria meningitidis WUE 2594, complete genomeputative electron transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO; ETF-ubiquinone oxidoreductase; ETF dehydrogenase; electron-transferring-fla3e-1789.7
NC_013016:500789:5034515034515052081758Neisseria meningitidis alpha14 chromosome, complete genomeputative electron transfer flavoprotein-ubiquinone oxidoreductase5e-1789.4
NC_015138:2364500:2380261238026123819671707Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeelectron-transferring-flavoprotein dehydrogenase7e-1789
NC_021150:1627347:1627347162734716289961650Azotobacter vinelandii CA6, complete genomeElectron transfer flavoprotein-ubiquinone oxidoreductase6e-1789
NC_012560:1627334:1627334162733416289831650Azotobacter vinelandii DJ, complete genomeElectron transfer flavoprotein-ubiquinone oxidoreductase6e-1789
NC_011035:1348659:1367407136740713690681662Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeElectron transfer flavoprotein-ubiquinone oxidoreductase6e-1789
NC_017511:1257663:1275407127540712770681662Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative electron transfer flavoprotein-ubiquinone oxidoreductase6e-1789
NC_005125:3570385:3570385357038535721031719Gloeobacter violaceus PCC 7421, complete genomeprobable electron transfer flavoprotein-ubiquinone oxidoreductase7e-1788.6
NC_009727:1177390:1196748119674811983731626Coxiella burnetii Dugway 7E9-12, complete genomeelectron-transferring-flavoprotein dehydrogenase1e-1688.2
NC_008767:549351:5493515493515510121662Neisseria meningitidis FAM18, complete genomeputative electron transfer flavoprotein-ubiquinone oxidoreductase1e-1687.8
NC_017517:635235:6366846366846383451662Neisseria meningitidis M01-240355 chromosome, complete genomeelectron-transferring-flavoprotein dehydrogenase2e-1687.4
NC_017514:1640355:1658272165827216599331662Neisseria meningitidis M01-240149 chromosome, complete genomeelectron-transferring-flavoprotein dehydrogenase2e-1687.4
NC_017518:672790:6752236752236768841662Neisseria meningitidis NZ-05/33 chromosome, complete genomeelectron-transferring-flavoprotein dehydrogenase2e-1687.4
NC_013209:2759160:2773866277386627755031638Acetobacter pasteurianus IFO 3283-01, complete genomeelectron transfer flavoprotein-ubiquinone oxidoreductase2e-1687.4
NC_017501:1750580:1766322176632217679831662Neisseria meningitidis 8013, complete genomeputative electron transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO; ETF-ubiquinone oxidoreductase; ETF dehydrogenase; electron-transferring-fla4e-1686.3
NC_003112:603879:6084616084616101221662Neisseria meningitidis MC58, complete genomeelectron transfer flavoprotein-ubiquinone oxidoreductase5e-1685.9
NC_010623:1871492:1889043188904318907101668Burkholderia phymatum STM815 chromosome 2, complete sequenceElectron-transferring-flavoprotein dehydrogenase9e-1685.1
NC_010512:1015557:1022850102285010245201671Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceElectron-transferring-flavoprotein dehydrogenase3e-1583.6
NC_012125:894955:9054809054809069671488Salmonella enterica subsp. enterica serovar Paratyphi C straindehydrogenase (flavoprotein)6e-1582.4
NC_018000:1852691:1855155185515518568191665Sinorhizobium fredii USDA 257 chromosome, complete genomeelectron transfer flavoprotein-ubiquinone oxidoreductase8e-1478.6
NC_011060:2525367:2527030252703025287031674Pelodictyon phaeoclathratiforme BU-1, complete genomeElectron-transferring-flavoprotein dehydrogenase6e-1375.9
NC_008740:1635137:1657397165739716590491653Marinobacter aquaeolei VT8, complete genomeElectron-transferring-flavoprotein dehydrogenase1e-1274.7
NC_020541:625925:6472816472816488911611Rhodanobacter sp. 2APBS1, complete genomeflavin-dependent dehydrogenase1e-1274.7
NC_020389:714178:7172187172187184081191Methanosarcina mazei Tuc01, complete genomeGeranylgeranyl diphosphate reductase4e-0963.2
NC_003901:860242:8647088647088659341227Methanosarcina mazei Go1, complete genomeoxidoreductase1e-0861.2
NC_017033:3013654:3015761301576130173591599Frateuria aurantia DSM 6220 chromosome, complete genomeflavin-dependent dehydrogenase1e-0861.2
NC_003552:4782635:4787607478760747887971191Methanosarcina acetivorans C2A, complete genomebacteriochlorophyll synthase1e-0655.1