Pre_GI: BLASTP Hits

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Query: NC_009800:2889928:2905619 Escherichia coli HS, complete genome

Start: 2905619, End: 2907331, Length: 1713

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:1029471:1033300103330010350121713Escherichia coli ATCC 8739, complete genomesulfite reductase (NADPH) hemoprotein, beta-component01110
NC_012759:2757826:2772221277222127739331713Escherichia coli BW2952 chromosome, complete genomesulfite reductase subunit beta01107
NC_000913:2873443:2886409288640928881211713Escherichia coli K12, complete genomesulfite reductase, beta subunit, NAD(P)-binding, heme-binding01107
AC_000091:2872000:2887043288704328887551713Escherichia coli W3110 DNA, complete genomesulfite reductase, beta subunit, NAD(P)-binding01107
NC_013850:985331:9871309871309888421713Klebsiella variicola At-22 chromosome, complete genomesulfite reductase (NADPH) hemoprotein, beta-component01073
NC_015224:889536:8895368895368912841749Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,sulfite reductase subunit beta0934
NC_016632:285408:2854082854082871231716Serratia symbiotica str. 'Cinara cedri' chromosome, completesulfite reductase (NADPH) hemoprotein beta-component0904
NC_008570:3777469:3799792379979238015041713Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesulfite reductase (NADPH) hemoprotein, beta-component0829
NC_018419:226000:2378632378632395631701Secondary endosymbiont of Ctenarytaina eucalypti chromosome,sulfite reductase (NADPH) hemoprotein, beta-component0801
NC_007984:221030:2307162307162324161701Baumannia cicadellinicola str. Hc (Homalodisca coagulata), completesulfite reductase (NADPH) hemoprotein, beta subunit0774
NC_011283:4438500:4482047448204744837411695Klebsiella pneumoniae 342 chromosome, complete genomesulfite reductase (NADPH) hemoprotein subunit beta0747
NC_007350:2460134:2469880246988024715891710Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,putative sulfite reductase hemoprotein beta-component1e-148526
NC_017353:361350:3825733825733842821710Staphylococcus lugdunensis N920143, complete genomesulfite reductase family protein6e-148524
NC_020164:280087:2899722899722916901719Staphylococcus warneri SG1, complete genomesulfite reductase subunit beta5e-143508
NC_011761:2785660:2809141280914128108321692Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesulfite reductase (NADPH) hemoprotein subunit beta5e-143508
NC_011206:2685499:2708980270898027106711692Acidithiobacillus ferrooxidans ATCC 53993, complete genomeSulfite reductase (NADPH)5e-143508
NC_002488:1430680:1447053144705314487591707Xylella fastidiosa 9a5c, complete genomeNADPH-sulfite reductase, iron-sulfur protein1e-135484
NC_004757:905417:9266159266159283361722Nitrosomonas europaea ATCC 19718, complete genomeNitrite and sulfite reductase9e-132471
NC_011884:3881568:3881568388156838835501983Cyanothece sp. PCC 7425, complete genomesulfite reductase, ferredoxin dependent1e-87324
NC_009481:1190301:1217248121724812190141767Synechococcus sp. WH 7803 chromosome, complete genomesulfite reductase subunit beta2e-68260
NC_012691:2050957:205222920522292052576348Tolumonas auensis DSM 9187, complete genome6e-33142
NC_010617:558954:5856355856355872931659Kocuria rhizophila DC2201, complete genomeputative nitrite/sulfite reductase7e-23108
NC_012704:1979183:1984045198404519859941950Corynebacterium kroppenstedtii DSM 44385, complete genomesulfite reductase2e-21104
NC_017186:7333732:7335792733579273374801689Amycolatopsis mediterranei S699 chromosome, complete genomeferredoxin-nitrite reductase3e-21103
NC_014318:7333688:7335748733574873374361689Amycolatopsis mediterranei U32 chromosome, complete genomeferredoxin-nitrite reductase3e-21103
NC_003364:1528762:1537780153778015393841605Pyrobaculum aerophilum str. IM2, complete genomeferredoxin-nitrite reductase5e-21103
NC_020302:2829484:2834634283463428363311698Corynebacterium halotolerans YIM 70093 = DSM 44683, completeferredoxin--nitrite reductase1e-20101
NC_014829:3562478:3572660357266035742851626Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeFerredoxin--nitrite reductase3e-20100
NC_010545:2025000:2039881203988120415601680Corynebacterium urealyticum DSM 7109, complete genomesulfite reductase2e-1998.2
NC_005070:2374850:2379775237977523813161542Synechococcus sp. WH 8102, complete genomeFerredoxin--nitrite reductase2e-1894.7
NC_017161:1012874:1020823102082310236422820Hydrogenobacter thermophilus TK-6 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase8e-1789.4
NC_013799:1012884:1020833102083310236522820Hydrogenobacter thermophilus TK-6, complete genomeassimilatory nitrite reductase8e-1789.4
NC_000911:2747604:2769125276912527706331509Synechocystis sp. PCC 6803, complete genomeferredoxin--nitrite reductase9e-1789
NC_017039:2745432:2766953276695327684611509Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeferredoxin--nitrite reductase9e-1789
NC_017052:2745420:2766941276694127684491509Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeferredoxin--nitrite reductase9e-1789
NC_013202:418500:4193734193734211331761Halomicrobium mukohataei DSM 12286, complete genomeFerredoxin--nitrite reductase2e-1688.2
NC_015673:289578:3157213157213174091689Corynebacterium resistens DSM 45100 chromosome, complete genomesulfite reductase1e-1585.1
NC_011666:1923776:1946669194666919484411773Methylocella silvestris BL2, complete genomeprecorrin-3B synthase2e-1584.3
NC_006396:2625962:2652478265247826542411764Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceferredoxin-nitrite reductase4e-1583.6
NC_014297:1:4665466564071743Halalkalicoccus jeotgali B3 chromosome, complete genomenitrite and sulphite reductase 4Fe-4S region5e-1479.7
NC_018664:2638102:2649144264914426507211578Clostridium acidurici 9a chromosome, complete genomeferredoxin-nitrite reductase NirA2e-1378.2
NC_015064:2421034:2442971244297124447191749Acidobacterium sp. MP5ACTX9 chromosome, complete genomenitrite and sulphite reductase 4Fe-4S region2e-1378.2
NC_006350:1084930:1113921111392111156001680Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative sulfite reductase2e-0757.8
NC_015410:3701000:3722233372223337239001668Pseudomonas mendocina NK-01 chromosome, complete genomenitrite and sulfite reductase 4Fe-4S region3e-0757.4