Pre_GI: BLASTP Hits

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Query: NC_009800:2889928:2889928 Escherichia coli HS, complete genome

Start: 2889928, End: 2890239, Length: 312

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006570:707280:729006729006729296291Francisella tularensis subsp. tularensis Schu 4, complete genomecell division protein4e-0650.1
NC_012751:1538500:155710615571061557420315Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completecell division protein1e-24111
NC_008245:707984:728958728958729248291Francisella tularensis subsp. tularensis FSC 198, complete genomecell division protein4e-0650.1
NC_016445:2938887:297082129708212971105285Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completecell division protein FtsB8e-1785.5
NC_016937:707279:729005729005729295291Francisella tularensis subsp. tularensis TI0902 chromosome,Cell division protein FtsB4e-0650.1
NC_014562:2563466:260867326086732608990318Pantoea vagans C9-1 chromosome, complete genomeCell division protein ftsB5e-36149
NC_016933:783938:804912804912805202291Francisella tularensis TIGB03 chromosome, complete genomeCell division protein FtsB4e-0650.1
NC_008601:631504:653855653855654145291Francisella tularensis subsp. novicida U112, complete genomecell division protein, septum formation initiator4e-0650.1
NC_016632:285408:297661297661297981321Serratia symbiotica str. 'Cinara cedri' chromosome, completeessential cell division protein1e-26118
NC_002940:1065246:108773110877311088006276Haemophilus ducreyi 35000HP, complete genomehypothetical protein1e-1478.2
NC_004344:589375:615551615551615874324Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-0548.9
NC_010468:1029471:105106410510641051375312Escherichia coli ATCC 8739, complete genomeSeptum formation initiator1e-46184
NC_014931:2336465:235675623567562357034279Variovorax paradoxus EPS chromosome, complete genomeSeptum formation initiator4e-0753.5
NC_010995:2547164:255882725588272559108282Cellvibrio japonicus Ueda107, complete genomeSeptum formation initiator superfamily2e-0961.6