Pre_GI: BLASTP Hits

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Query: NC_009800:2156091:2164982 Escherichia coli HS, complete genome

Start: 2164982, End: 2165833, Length: 852

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016612:5391706:542180054218005422654855Klebsiella oxytoca KCTC 1686 chromosome, complete genomeglycosyltransferase2e-39162
NC_005966:69689:696896968970573885Acinetobacter sp. ADP1, complete genomeputative glycosyl transferase family 29e-33140
NC_009648:2699739:273491527349152735766852Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeglycosyltransferase8e-31134
NC_014837:387868:403281403281404024744Pantoea sp. At-9b chromosome, complete genomehypothetical protein9e-23107
NC_014839:253961:277966277966278706741Pantoea sp. At-9b plasmid pPAT9B02, complete sequencehypothetical protein3e-1892.4
NC_021150:201237:208136208136208861726Azotobacter vinelandii CA6, complete genomeglycosyl transferase protein5e-1272
NC_012560:201237:208136208136208861726Azotobacter vinelandii DJ, complete genomeglycosyl transferase protein5e-1272
NC_007613:864084:879345879345880187843Shigella boydii Sb227, complete genomeputative glycosyl transferase4e-1065.5