Pre_GI: BLASTP Hits

Some Help

Query: NC_009800:2083465:2101990 Escherichia coli HS, complete genome

Start: 2101990, End: 2103069, Length: 1080

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:1816359:1817656181765618187351080Escherichia coli ATCC 8739, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0707
NC_011601:2139188:2178423217842321795021080Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0705
NC_013353:2455052:2458475245847524595541080Escherichia coli O103:H2 str. 12009, complete genomenicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase0702
AP010958:2455052:2458475245847524595541080Escherichia coli O103:H2 str. 12009 DNA, complete genomenicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase0702
NC_007946:2155454:2169441216944121705201080Escherichia coli UTI89, complete genomeCobT, subunit of dimethylbenzimidazole phosphoribosyltransferase0701
NC_004431:2304280:2318276231827623193551080Escherichia coli CFT073, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0701
CP002797:2062006:2064378206437820654571080Escherichia coli NA114, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0701
NC_008253:2056734:2070753207075320718321080Escherichia coli 536, complete genomenicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase0701
NC_000913:2042935:2061412206141220624911080Escherichia coli K12, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0697
NC_010473:2119480:2152420215242021534991080Escherichia coli str. K-12 substr. DH10B, complete genomenicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase0697
AC_000091:2027648:2065525206552520666041080Escherichia coli W3110 DNA, complete genomenicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase0697
NC_011745:2209288:2270429227042922715081080Escherichia coli ED1a chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0697
NC_012759:1920955:1953895195389519549741080Escherichia coli BW2952 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0697
NC_012947:1769438:1770193177019317712721080Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0697
NC_012967:1967675:2001388200138820024671080Escherichia coli B str. REL606 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0697
NC_016822:2201388:2241504224150422425831080Shigella sonnei 53G, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase0696
NC_011094:2061000:2076832207683220779021071Salmonella enterica subsp. enterica serovar Schwarzengrund strnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase4e-159560
NC_004631:948054:9488249488249498941071Salmonella enterica subsp. enterica serovar Typhi Ty2, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-158559
NC_016832:948029:9487789487789498481071Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-158559
NC_011149:2040396:2055144205514420562141071Salmonella enterica subsp. enterica serovar Agona str. SL483,nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase8e-158556
NC_009648:3476000:3497239349723934982941056Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase5e-154543
NC_012962:1827000:1845113184511318461621050Photorhabdus asymbiotica, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase7e-126450
NC_017295:1507956:1515225151522515162831059Clostridium acetobutylicum EA 2018 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase9e-80297
NC_003030:1510000:1515811151581115168691059Clostridium acetobutylicum ATCC 824, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase9e-80297
NC_015687:1508664:1517412151741215184701059Clostridium acetobutylicum DSM 1731 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase9e-80297
NC_014328:3482980:3493284349328434943601077Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase4e-78291
NC_013385:1669510:1675537167553716766131077Ammonifex degensii KC4, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase2e-77289
NC_009617:1487110:1495644149564414967351092Clostridium beijerinckii NCIMB 8052 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-75283
NC_014622:1514416:1523862152386215249321071Paenibacillus polymyxa SC2 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-73277
NC_020291:1593143:1602208160220816033021095Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT6e-73274
NC_015565:624298:6307266307266317811056Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-72273
NC_014483:1376500:1386104138610413871741071Paenibacillus polymyxa E681 chromosome, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-71270
NC_016148:141011:1577331577331587821050Thermovirga lienii DSM 17291 chromosome, complete genomenicotinate- nucleotide/dimethylbenzimidazolephosphoribosyltransferase9e-71267
NC_015519:1113095:1129924112992411309791056Tepidanaerobacter sp. Re1 chromosome, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-69263
NC_016641:3173250:3183221318322131842911071Paenibacillus terrae HPL-003 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-69263
NC_011296:1151346:1153584115358411546271044Thermodesulfovibrio yellowstonii DSM 11347, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase)1e-69263
NC_014377:149288:1507871507871518421056Thermosediminibacter oceani DSM 16646 chromosome, complete genomenicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase5e-66251
NC_012491:1263469:1282874128287412839141041Brevibacillus brevis NBRC 100599, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase4e-65248
NC_013517:1055854:1110499111049911115301032Sebaldella termitidis ATCC 33386, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase4e-64245
NC_021171:415771:4312054312054322481044Bacillus sp. 1NLA3E, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase6e-63241
NC_011060:1334836:1353642135364213547061065Pelodictyon phaeoclathratiforme BU-1, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase9e-62237
NC_014632:567289:5800125800125810641053Ilyobacter polytropus DSM 2926 chromosome, complete genomenicotinate- nucleotide/dimethylbenzimidazolephosphoribosyltransferase4e-57222
NC_009718:1470972:1475886147588614769321047Fervidobacterium nodosum Rt17-B1, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase3e-56219
NC_016516:463460:4676744676744693411668Propionibacterium acnes TypeIA2 P.acn33 chromosome, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase7e-56218
NC_006085:481231:4854394854394871061668Propionibacterium acnes KPA171202, complete genomephosphoribosyltransferase, cobalamin biosynthesis enzyme, fusion CobTU7e-56218
NC_014039:499233:5034415034415051081668Propionibacterium acnes SK137 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase7e-56218
NC_016511:472666:4768744768744785441671Propionibacterium acnes TypeIA2 P.acn31 chromosome, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase5e-56218
NC_014484:762710:7832327832327843381107Spirochaeta thermophila DSM 6192 chromosome, complete genomenicotinate-nucleotide-- dimethylbenzimidazolephosphoribosyltransferase1e-53210
NC_008148:672608:6811456811456822331089Rubrobacter xylanophilus DSM 9941, complete genomeNicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase1e-52207
NC_010506:4951500:4955400495540049564401041Shewanella woodyi ATCC 51908, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-51203
NC_007481:3167434:3187459318745931885201062Pseudoalteromonas haloplanktis TAC125 chromosome I, completenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase5e-51201
NC_018012:1789028:1809405180940518104601056Thiocystis violascens DSM 198 chromosome, complete genomenicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase6e-51201
NC_015957:3067919:3067919306791930721364218Streptomyces violaceusniger Tu 4113 chromosome, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase8e-51201
NC_007951:1042291:1062971106297110640321062Burkholderia xenovorans LB400 chromosome 1, complete sequenceNicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase1e-49197
NC_009831:4539952:4541429454142945424571029Shewanella sediminis HAW-EB3, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase9e-50197
NC_012969:142000:1600261600261610691044Methylovorus glucosetrophus SIP3-4 chromosome, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase2e-45183
NC_008321:977500:9972599972599983111053Shewanella sp. MR-4, complete genomeNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-44180
NC_011663:1159070:1180990118099011820721083Shewanella baltica OS223 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-44179
NC_003228:2929006:2933152293315229341891038Bacteroides fragilis NCTC 9343, complete genomeputative phosphoribosyltransferase2e-43176
NC_016776:2913966:2918112291811229191491038Bacteroides fragilis 638R, complete genomeputative phosphoribosyltransferase2e-43176
NC_015497:3794000:3813300381330038144931194Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase1e-41171
NC_014221:398636:4208564208564219081053Truepera radiovictrix DSM 17093 chromosome, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase9e-37154
NC_016802:1615748:1632702163270216337721071Corynebacterium diphtheriae HC02 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase2e-36153
NC_019673:1656680:1661735166173516627721038Saccharothrix espanaensis DSM 44229 complete genomeNicotinate-nucleotide- dimethylbenzimidazolephosphoribosyltransferase3e-36152
NC_004369:2203947:2221692222169222227981107Corynebacterium efficiens YS-314, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase8e-34144
NC_011758:326366:3424093424093434371029Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase4e-32139
NC_011894:3885490:3886516388651638875471032Methylobacterium nodulans ORS 2060, complete genomenicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase2e-31136
NC_017068:1327025:1327025132702513280411017Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-30134
NC_011989:1638261:1659670165967016606921023Agrobacterium vitis S4 chromosome 1, complete sequencenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase4e-29129
NC_010162:9641549:9640464964046496415521089Sorangium cellulosum 'So ce 56', complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase1e-26121
NC_015675:4565500:458476745847674585765999Mesorhizobium opportunistum WSM2075 chromosome, complete genomeNicotinate-nucleotide--dimethylbenzimidazolephos phoribosyltransferase4e-1685.9
NC_009719:1135523:116249911624991163476978Parvibaculum lavamentivorans DS-1 chromosome, complete genomenicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase7e-1375.1