Pre_GI: BLASTP Hits

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Query: NC_009800:2083465:2083465 Escherichia coli HS, complete genome

Start: 2083465, End: 2090616, Length: 7152

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:1967675:1982862198286219900137152Escherichia coli B str. REL606 chromosome, complete genomeadhesin04544
AC_000091:2027648:2047048204704820541517104Escherichia coli W3110 DNA, complete genomeadhesin04512
NC_010473:2119480:2133943213394321410467104Escherichia coli str. K-12 substr. DH10B, complete genomeadhesin04512
NC_000913:2042935:2042935204293520500387104Escherichia coli K12, complete genomeadhesin04512
NC_000913:2028472:2042935204293520500387104Escherichia coli K12, complete genomeadhesin04512
NC_011745:2209288:2222625222262522297287104Escherichia coli ED1a chromosome, complete genomeadhesin04512
NC_012759:1920955:1935445193544519425217077Escherichia coli BW2952 chromosome, complete genomeadhesin04497
NC_012947:1769438:1782647178264717897237077Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeIg domain protein group 1 domain protein04497
NC_011741:2091249:2106830210683021132736444Escherichia coli IAI1 chromosome, complete genomeadhesin04011
CU928160:2091249:2106830210683021132736444Escherichia coli IAI1 chromosome, complete genomeadhesin04011
NC_011751:2327014:2343400234340023514578058Escherichia coli UMN026 chromosome, complete genomeputative invasin02412
NC_016822:2201388:2225691222569122285882898Shigella sonnei 53G, complete genomefactor01701
NC_010498:4967724:4986675498667549919155241Escherichia coli SMS-3-5, complete genomeputative invasin01308
NC_011750:4390000:4426636442663644351468511Escherichia coli IAI39 chromosome, complete genomeputative invasin/intimin protein01220
NC_011751:4293966:43084164308416431867210257Escherichia coli UMN026 chromosome, complete genomehypothetical protein01211
CP002516:1902431:1902431190243119095337103Escherichia coli KO11, complete genome01092
CP002185:2181936:2196349219634922034247076Escherichia coli W, complete genome01074
NC_011740:1831845:1842932184293218462013270Escherichia fergusonii ATCC 35469, complete genomeputative adhesin yeeJ (fragment)0643
NC_011751:348000:3643533643533686064254Escherichia coli UMN026 chromosome, complete genomeputative adhesin2e-156555
NC_013892:2108175:2108175210817521148286654Xenorhabdus bovienii SS-2004 chromosome, complete genomeinvasin2e-154548
NC_010498:301000:3370363370363412894254Escherichia coli SMS-3-5, complete genomeputative invasin2e-153545
NC_013508:343617:3614503614503685297080Edwardsiella tarda EIB202, complete genomeputative invasin2e-151538
NC_010465:1427170:1441580144158014475105931Yersinia pseudotuberculosis YPIII, complete genomeIg domain protein group 1 domain protein6e-140500
NC_009800:349592:3618143618143660674254Escherichia coli HS, complete genomeputative intimin7e-131470
NC_008253:334467:3878813878813921284248Escherichia coli 536, complete genomeputative adhesin/invasin7e-131470
NC_011601:273430:2910262910262952764251Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeadhesin/invasin1e-130469
NC_008563:318993:3327733327733370234251Escherichia coli APEC O1, complete genomeattaching and effacing protein, pathogenesis factor EaeH3e-130468
NC_007946:289425:3311833311833354334251Escherichia coli UTI89, complete genomeattaching and effacing protein, pathogenesis factor3e-130468
NC_011742:291237:3205483205483247984251Escherichia coli S88 chromosome, complete genomeadhesin3e-130468
NC_013941:378555:3924543924543967074254Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-130467
NC_004431:364000:3957113957113999614251Escherichia coli CFT073, complete genomePutative adhesin5e-130467
NC_012779:2856051:2863547286354728688415295Edwardsiella ictaluri 93-146, complete genomeIg domain protein group 1 domain protein5e-128460
NC_013508:3188978:3198205319820532004572253Edwardsiella tarda EIB202, complete genomeputative invasin8e-117423
NC_009801:3374501:3377803337780333810573255Escherichia coli E24377A, complete genomebacterial Ig family protein5e-102374
NC_012947:3487392:3496612349661234978441233Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-86323
NC_010634:2004653:2024094202409420270032910Yersinia pseudotuberculosis PB1/+, complete genomeinvasin region 35e-86321
NC_013892:3278647:3313152331315233164093258Xenorhabdus bovienii SS-2004 chromosome, complete genomeinvasin8e-81303
NC_013892:1457500:1474720147472014779773258Xenorhabdus bovienii SS-2004 chromosome, complete genomeinvasin8e-81303
NC_014228:3442159:3442159344215934454163258Xenorhabdus nematophila ATCC 19061, complete genomeputative invasin2e-80302
NC_013353:3669500:3686375368637536892212847Escherichia coli O103:H2 str. 12009, complete genomeintimin epsilon7e-79297
AP010958:3669500:3686375368637536892212847Escherichia coli O103:H2 str. 12009 DNA, complete genomeintimin epsilon7e-79297
NC_013361:5319497:5354665535466553574842820Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintimin9e-79296
NC_013008:4643825:4655603465560346584072805Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintimin adherence protein2e-78295
NC_011353:4688000:4699562469956247023662805Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeintimin C-type lectin domain-containing protein2e-78295
NC_002695:4584177:4596458459645845992622805Escherichia coli O157:H7 str. Sakai, complete genomegamma intimin2e-78295
NC_002655:4653160:4665441466544146682452805Escherichia coli O157:H7 EDL933, complete genomeintimin adherence protein2e-78295
NC_009778:959982:9638289638289669113084Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-78295
NC_013941:4470932:4483968448396844867722805Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeGamma intimin3e-78295
NC_013892:2689645:2701516270151627050253510Xenorhabdus bovienii SS-2004 chromosome, complete genomeinvasin2e-77293
NC_010473:279948:289131289131290018888Escherichia coli str. K-12 substr. DH10B, complete genomeattaching and effacing protein, pathogenesis factor5e-77291
AC_000091:303719:313581313581314468888Escherichia coli W3110 DNA, complete genomeattaching and effacing protein, pathogenesis factor5e-77291
NC_000913:303719:313581313581314468888Escherichia coli K12, complete genomeattaching and effacing protein, pathogenesis factor5e-77291
NC_011601:4096427:4110343411034341131622820Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintimin EaeA3e-77291
NC_013364:3701895:3728030372803037308372808Escherichia coli O111:H- str. 11128, complete genometheta intimin1e-76290
NC_011601:2854178:2860904286090428630392136Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintimin-like protein1e-72276
NC_010468:1816359:1856327185632718634297103Escherichia coli ATCC 8739, complete genome3e-70268
NC_008570:1143578:1151726115172611544762751Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeinvasin family protein7e-66254
NC_016861:22256:248252482525241417Salmonella enterica subsp. enterica serovar Typhimurium strputative adhesin4e-49198
NC_011741:2091249:210656821065682106918351Escherichia coli IAI1 chromosome, complete genome5e-43178
CU928160:2091249:210656821065682106918351Escherichia coli IAI1 chromosome, complete genomefragment of putative invasin (part 1)5e-43178
NC_015277:2568781:25687812568781258442815648Sphingobacterium sp. 21 chromosome, complete genomeconserved repeat domain protein4e-41171
NC_011740:1595381:1602900160290016049182019Escherichia fergusonii ATCC 35469, complete genomeputative invasin-like protein; putative exported protein3e-39166
NC_011149:1429523:1439953143995314419351983Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein6e-38161
NC_016857:1709695:1718053171805317200351983Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74invasin-like protein1e-37160
NC_016810:1709695:1718053171805317200351983Salmonella enterica subsp. enterica serovar Typhimurium strinvasin-like protein1e-37160
NC_017046:1709578:1717936171793617199181983Salmonella enterica subsp. enterica serovar Typhimurium str. 798invasin-like protein2e-37159
NC_016863:1711832:1719369171936917213511983Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1invasin-like protein2e-37159
NC_016860:1752000:1758891175889117608731983Salmonella enterica subsp. enterica serovar Typhimurium strinvasin-like protein2e-37159
NC_016856:1763640:1771177177117717731591983Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sinvasin-like protein2e-37159
NC_003197:1753663:1761200176120017631821983Salmonella typhimurium LT2, complete genomeinvasin-like protein2e-37159
NC_011094:1726000:1734376173437617363581983Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-37159
NC_004631:1623511:1631872163187216338541983Salmonella enterica subsp. enterica serovar Typhi Ty2, completeinvasin-like protein5e-37158
NC_011080:1750000:1757552175755217595341983Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein4e-37158
NC_003198:1336894:1347328134732813493101983Salmonella enterica subsp. enterica serovar Typhi str. CT18,invasin-like protein1e-36157
NC_006511:1273162:1283585128358512855681984Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC6e-24115
NC_015259:673662:7162827162827196143333Polymorphum gilvum SL003B-26A1 chromosome, complete genomeSoluble lytic murein transglycosylase and regulatory protein1e-1897.4
NC_003277:22257:2421524215252421028Salmonella typhimurium LT2 plasmid pSLT, complete sequence7e-1378.2
NC_013508:3188978:3195846319584631971951350Edwardsiella tarda EIB202, complete genomehypothetical protein7e-1378.2
NC_016861:22256:242142421424801588Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1277.8
NC_013406:1640787:1645194164519416520366843Paenibacillus sp. Y412MC10 chromosome, complete genomeS-layer domain-containing protein2e-1277
NC_008570:1143578:1155644115564411572511608Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeintimin/invasin family protein4e-0759.3
NC_009778:959982:9583609583609599851626Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0657