Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2071672 Escherichia coli HS, complete genome

Start: 2071672, End: 2072121, Length: 450

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:3282500:331080433108043311253450Xenorhabdus nematophila ATCC 19061, complete genomeputative bacteriophage protein1e-1788.6
NC_002937:255790:257565257565258041477Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative9e-1785.9
NC_002937:2933000:295284429528442953320477Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative3e-1684
NC_010102:1779707:180386118038611804274414Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-1373.2
NC_011094:2115750:213125821312582131671414Salmonella enterica subsp. enterica serovar Schwarzengrund strphage protein GP465e-1373.2
NC_011205:2137696:215260021526002153013414Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage protein GP465e-1373.2
NC_011294:2009388:202429320242932024706414Salmonella enterica subsp. enterica serovar Enteritidis strphage protein5e-1373.2
NC_016810:2027311:204557620455762045989414Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein5e-1373.2
NC_016856:2085283:209941320994132099826414Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein5e-1373.2
NC_016857:2027311:204557620455762045989414Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative tail protein5e-1373.2
NC_016863:2029340:204760520476052048018414Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein5e-1373.2
NC_017046:2026672:204493720449372045350414Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein5e-1373.2
NC_007712:1182518:119620711962071196617411Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein6e-1269.7
NC_002947:4362271:438552343855234385909387Pseudomonas putida KT2440, complete genomephage FluMu protein gp461e-1065.5
NC_007946:2894793:290984929098492910274426Escherichia coli UTI89, complete genomebacteriophage V tail protein1e-0962
NC_008563:2909945:292487629248762925304429Escherichia coli APEC O1, complete genomebacteriophage V tail protein1e-0962
NC_011742:2823000:284218628421862842614429Escherichia coli S88 chromosome, complete genometail protein1e-0962
NC_011740:621408:623032623032623460429Escherichia fergusonii ATCC 35469, complete genomeputative tail protein1e-0962
NC_011750:2928990:294167329416732942101429Escherichia coli IAI39 chromosome, complete genomeputative tail protein1e-0962
NC_008258:269806:271433271433271858426Shigella flexneri 5 str. 8401, complete genometail protein1e-0961.6
NC_000907:1568867:158883415888341589241408Haemophilus influenzae Rd KW20, complete genomehypothetical protein4e-0960.1
NC_009436:2776410:279160927916092792034426Enterobacter sp. 638, complete genomephage GP46 family protein7e-0959.3