Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2070534 Escherichia coli HS, complete genome

Start: 2070534, End: 2071682, Length: 1149

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012751:899394:912848912848913759912Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage baseplate J-like protein9e-71267
NC_011365:592256:6301736301736312641092Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomebaseplate J family protein2e-31137
NC_008258:269806:2718452718452729031059Shigella flexneri 5 str. 8401, complete genomehypothetical protein9e-30131
NC_011740:621408:6234476234476245051059Escherichia fergusonii ATCC 35469, complete genomeputative baseplate J-like phage protein2e-28126
NC_011750:2928990:2940628294062829416861059Escherichia coli IAI39 chromosome, complete genomeputative baseplate J-like phage protein6e-28125
NC_011742:2823000:2841141284114128421991059Escherichia coli S88 chromosome, complete genomebaseplate J-like phage protein6e-27122
NC_007946:2894793:2908804290880429098621059Escherichia coli UTI89, complete genomebacteriophage V tail protein6e-27122
NC_008563:2909945:2923831292383129248891059Escherichia coli APEC O1, complete genomebacteriophage V tail protein7e-27121
NC_002937:255790:2580502580502591111062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative1e-25117
NC_002937:2933000:2951774295177429528351062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative7e-25115
NC_009436:2776410:2790564279056427916221059Enterobacter sp. 638, complete genomebaseplate J family protein4e-23109
NC_011294:2009388:2023221202322120243001080Salmonella enterica subsp. enterica serovar Enteritidis strphage protein8e-23108
NC_011205:2137696:2151528215152821526071080Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail protein8e-23108
NC_010102:1779707:1802789180278918038681080Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-23108
NC_012660:4558122:458160345816034582274672Pseudomonas fluorescens SBW25 chromosome, complete genome1e-22107
NC_011094:2115750:2130186213018621312651080Salmonella enterica subsp. enterica serovar Schwarzengrund strtail protein1e-22107
NC_002947:4362271:4384490438449043855331044Pseudomonas putida KT2440, complete genomephage FluMu protein gp475e-21102
NC_007712:1182518:1195147119514711962171071Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein6e-2099
NC_015733:1398083:1398968139896813999991032Pseudomonas putida S16 chromosome, complete genomephage FluMu protein gp477e-2098.6
NC_000907:1568867:1589241158924115903081068Haemophilus influenzae Rd KW20, complete genomehypothetical protein6e-1892
AC_000091:1191353:120783712078371208499663Escherichia coli W3110 DNA, complete genomehypothetical protein2e-1687
NC_000913:1188999:120548312054831206145663Escherichia coli K12, complete genomee14 prophage; conserved protein2e-1687
NC_014228:3282500:3311254331125433123271074Xenorhabdus nematophila ATCC 19061, complete genomeputative bacteriophage protein4e-1376.3
NC_012563:2566500:2570289257028925714191131Clostridium botulinum A2 str. Kyoto, complete genomeputative baseplate J-like protein6e-1168.9
NC_009495:2479465:2482266248226624833961131Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein3e-0963.5
NC_009633:2592000:2597032259703225981681137Alkaliphilus metalliredigens QYMF chromosome, complete genomebaseplate J family protein3e-0963.2
NC_017046:2026672:204386420438642044385522Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein4e-0859.7
NC_016810:2027311:204450320445032045024522Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage protein4e-0859.7
NC_016863:2029340:204653220465322047053522Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein5e-0859.3
NC_018604:305957:3438113438113448571047Brachyspira pilosicoli WesB complete genomehypothetical protein1e-0757.8
NC_002927:3827211:3837547383754738386171071Bordetella bronchiseptica RB50, complete genomeputative phage tail protein4e-0755.8
NC_014652:801653:8283658283658294471083Caldicellulosiruptor hydrothermalis 108 chromosome, completebaseplate j family protein7e-0755.1
NC_012559:1888000:189030918903091891148840Laribacter hongkongensis HLHK9, complete genomeProbable phage FluMu protein gp471e-0654.7