Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2069863 Escherichia coli HS, complete genome

Start: 2069863, End: 2070537, Length: 675

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002937:2933000:295113929511392951765627Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative2e-27122
NC_002937:255790:259120259120259746627Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative5e-27120
NC_015733:1398083:139999013999901400634645Pseudomonas putida S16 chromosome, complete genomehypothetical protein4e-23108
NC_002947:4362271:438385543838554384499645Pseudomonas putida KT2440, complete genomehypothetical protein1e-21103
NC_011740:621408:624496624496625080585Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; e14 prophage2e-21102
NC_000913:1188999:120613612061361206720585Escherichia coli K12, complete genomee14 prophage; conserved protein3e-21102
AC_000091:1191353:120849012084901209074585Escherichia coli W3110 DNA, complete genomehypothetical protein3e-21102
NC_008258:269806:272894272894273478585Shigella flexneri 5 str. 8401, complete genomehypothetical protein3e-21101
NC_007946:2894793:290822929082292908813585Escherichia coli UTI89, complete genomebacteriophage V tail protein3e-21101
NC_008563:2909945:292325629232562923840585Escherichia coli APEC O1, complete genomehypothetical protein3e-21101
NC_011742:2823000:284056628405662841150585Escherichia coli S88 chromosome, complete genomehypothetical protein3e-21101
NC_011750:2928990:294005329400532940637585Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-2099.8
NC_009778:1556222:158586115858611586433573Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-1993.6
NC_012660:4558122:458101345810134581612600Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein3e-1891.7
NC_009436:2776410:278999227899922790573582Enterobacter sp. 638, complete genomehypothetical protein2e-1789.4
NC_014228:3282500:331231833123183312899582Xenorhabdus nematophila ATCC 19061, complete genomeputative prophage protein5e-1787.8
NC_007712:1182518:119455111945511195150600Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-1684.7
NC_011365:592256:631271631271631651381Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome1e-1273.2
NC_012559:1888000:188973418897341890312579Laribacter hongkongensis HLHK9, complete genomePutative phage tail protein1e-1169.7
NC_011094:2115750:212959621295962130183588Salmonella enterica subsp. enterica serovar Schwarzengrund strtail protein3e-1168.6
NC_011205:2137696:215093821509382151525588Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail protein3e-1168.6
NC_011294:2009388:202263120226312023218588Salmonella enterica subsp. enterica serovar Enteritidis strphage tail protein3e-1168.6
NC_016810:2027311:204391320439132044500588Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail protein3e-1168.6
NC_016856:2085283:209775020977502098337588Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-1168.6
NC_016857:2027311:204391320439132044500588Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative tail protein3e-1168.6
NC_016863:2029340:204594220459422046529588Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-1168.6
NC_017046:2026672:204327420432742043861588Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail protein3e-1168.6
NC_010102:1779707:180219918021991802786588Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1167.8
NC_002927:3827211:383697238369723837550579Bordetella bronchiseptica RB50, complete genomeputative phage tail protein6e-0651.2