Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2069051 Escherichia coli HS, complete genome

Start: 2069051, End: 2069836, Length: 786

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009256:2725836:273564327356432736542900Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein1e-0963.9
NC_007712:2028500:2053270205327020546611392Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-0755.5
NC_007712:532500:5400895400895411561068Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein9e-0857.4
NC_007712:1262593:126733812673381268234897Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein7e-0651.2
NC_007712:2806500:2825934282593428269411008Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-0962.4
NC_007712:2523583:253473025347302535245516Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-0653.1
NC_007712:1893066:190973119097311910555825Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-0963.2
NC_012751:899394:914405914405915106702Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage tail collar domain protein6e-1374.7
NC_015733:1398083:140063714006371401404768Pseudomonas putida S16 chromosome, complete genomeputative tail fiber protein6e-0754.7