Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2067981 Escherichia coli HS, complete genome

Start: 2067981, End: 2069072, Length: 1092

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007712:1997010:2007642200764220087211080Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-73276
NC_014972:544146:5774735774735785191047Desulfobulbus propionicus DSM 2032 chromosome, complete genomeacyltransferase 36e-22105
NC_008228:1404126:1427974142797414290321059Pseudoalteromonas atlantica T6c, complete genomeacyltransferase 31e-21103
NC_011769:2016000:2039862203986220408811020Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeacyltransferase 32e-1997.1
NC_008228:1404126:1417112141711214181281017Pseudoalteromonas atlantica T6c, complete genomeacyltransferase 36e-1892
NC_007510:913411:9211779211779223521176Burkholderia sp. 383 chromosome 1, complete sequenceAcyltransferase 32e-1687
NC_014306:3524980:3534454353445435354851032Erwinia billingiae Eb661, complete genomePredicted acyltransferase6e-0962
NC_009445:5357979:5367811536781153698652055Bradyrhizobium sp. ORS 278 chromosome, complete genomeacyltransferase8e-0755.1
NC_015185:1296917:130648413064841307473990Desulfurobacterium thermolithotrophum DSM 11699 chromosome,acyltransferase 31e-0654.3