Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2065622 Escherichia coli HS, complete genome

Start: 2065622, End: 2067616, Length: 1995

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016845:2306744:2318650231865023216733024Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein4e-23110
NC_013850:1887556:1933545193354519356532109Klebsiella variicola At-22 chromosome, complete genomehypothetical protein1e-1688.6
NC_009648:1541699:1590369159036915930052637Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeflagellar biosynthesis, cell-distal portion of basal-body rod2e-1688.6
NC_013850:2182337:2234367223436722362561890Klebsiella variicola At-22 chromosome, complete genomehypothetical protein2e-1688.2
NC_011283:2836000:2893261289326128951201860Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein7e-1686.3
NC_020181:5182568:5204244520424452062291986Enterobacter aerogenes EA1509E, complete genomehypothetical protein7e-1686.3
NC_021066:2197490:2207440220744022091881749Raoultella ornithinolytica B6, complete genomehypothetical protein4e-1584
NC_010511:225434:2504992504992521091611Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein2e-1481.6
NC_013850:2182337:2237926223792622399292004Klebsiella variicola At-22 chromosome, complete genomehypothetical protein3e-1067.8
NC_015733:1398083:1401666140166614039842319Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-0655.1