Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2060475 Escherichia coli HS, complete genome

Start: 2060475, End: 2061125, Length: 651

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:2522888:253333425333342533984651Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-112405
NC_013353:2272919:228052622805262281176651Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-112405
NC_011741:2091249:210308121030812103731651Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-112405
NC_011415:2248417:225931422593142259964651Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-112405
CU928160:2091249:210308121030812103731651Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative metal-binding protein1e-112405
AP010958:2272919:228052622805262281176651Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted metal-binding protein1e-112405
NC_009801:2159123:217084121708412171491651Escherichia coli E24377A, complete genomemetal-binding protein1e-112405
NC_010498:1210145:121737412173741218024651Escherichia coli SMS-3-5, complete genomemetal-binding protein3e-112404
CP002185:2181936:219276521927652193436672Escherichia coli W, complete genomeconserved metal-binding protein2e-112404
NC_002695:2655445:266591326659132666563651Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-112403
NC_002655:2730659:274112827411282741778651Escherichia coli O157:H7 EDL933, complete genomehypothetical protein6e-112403
NC_011353:2563056:257352425735242574174651Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein6e-112403
NC_013008:2561586:257250525725052573155651Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein6e-112403
NC_013941:2425233:243570124357012436351651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeRibulose-phosphate 3-epimerase precursor6e-112403
NC_010473:2119480:213040721304072131057651Escherichia coli str. K-12 substr. DH10B, complete genomeconserved metal-binding protein5e-112403
AC_000091:2027648:204351220435122044162651Escherichia coli W3110 DNA, complete genomeconserved metal-binding protein5e-112403
NC_000913:2028472:203939920393992040049651Escherichia coli K12, complete genomeconserved metal-binding protein5e-112403
NC_012759:1920955:193188219318821932532651Escherichia coli BW2952 chromosome, complete genomehypothetical protein5e-112403
CP002516:1902431:191241919124191913069651Escherichia coli KO11, complete genomeYodA domain-containing protein5e-112403
NC_016902:1902431:191241919124191913069651Escherichia coli KO11FL chromosome, complete genomeYodA domain-containing protein5e-112403
NC_016822:2201388:221796122179612218611651Shigella sonnei 53G, complete genomezinc/cadmium-binding protein1e-111402
NC_012967:1967675:197937419793741980024651Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-111402
NC_012947:1769438:179376917937691794419651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-111402
NC_008253:1938975:194616919461691946819651Escherichia coli 536, complete genomehypothetical protein YodA2e-111401
NC_004431:2185750:219301421930142193646633Escherichia coli CFT073, complete genomeHypothetical protein yodA3e-111400
NC_007613:1038000:105115410511541051804651Shigella boydii Sb227, complete genomehypothetical protein8e-111399
NC_008258:2045000:205215820521582052808651Shigella flexneri 5 str. 8401, complete genomehypothetical protein8e-111399
NC_004337:2035945:204349520434952044145651Shigella flexneri 2a str. 301, complete genomehypothetical protein8e-111399
NC_004741:2009769:202016720201672020817651Shigella flexneri 2a str. 2457T, complete genomehypothetical protein8e-111399
NC_017328:2090679:209909220990922099742651Shigella flexneri 2002017 chromosome, complete genomehypothetical protein8e-111399
NC_016832:1182496:121197612119761212626651Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Metal-binding protein yodA3e-88324
NC_011094:1282385:131250213125021313152651Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-88324
NC_004631:1182883:121300412130041213654651Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-88324
NC_016831:1083871:110884111088411109491651Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-87322
NC_016857:1276340:130269013026901303340651Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74metal-binding protein YodA1e-87322
NC_006905:1342474:137746113774611378111651Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein2e-87321
NC_003197:1320861:134584013458401346487648Salmonella typhimurium LT2, complete genomeputative periplasmic protein4e-87320
NC_016810:1276340:130269313026931303340648Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-87320
NC_016856:1326503:135581513558151356462648Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-87320
NC_016860:1317174:134352613435261344173648Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-87320
NC_016863:1277652:130400513040051304652648Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein4e-87320
NC_017046:1277787:130276613027661303413648Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-87320
NC_015761:1181186:122314512231451223795651Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-85315
NC_020211:2985157:299114329911432991793651Serratia marcescens WW4, complete genomezinc and cadmium binding protein, periplasmic4e-79293
NC_020063:2077233:209929720992972099941645Enterobacteriaceae bacterium strain FGI 57, complete genomeputative periplasmic or secreted protein5e-71267
NC_008563:2041345:204892720489272049274348Escherichia coli APEC O1, complete genomeYodA5e-55214
NC_019896:1483073:148485214848521485607756Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein8e-42170
NC_016941:2395502:2413739241373924152831545Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative solute binding lipoprotein1e-40166
NC_008022:556457:5741915741915757381548Streptococcus pyogenes MGAS10270, complete genomeHigh-affinity zinc uptake system protein znuA precursor / hypothetical exported protein7e-40163
NC_007168:665284:6652846652846668341551Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein8e-40163
NC_017347:2511783:2529219252921925307691551Staphylococcus aureus subsp. aureus T0131 chromosome, completeABC superfamily ATP binding cassette transporter, binding protein2e-39162
NC_017341:2544327:2561763256176325633131551Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ABC superfamily ATP binding cassette transporter, binding protein2e-39162
NC_016912:2329113:2346549234654923480991551Staphylococcus aureus subsp. aureus VC40 chromosome, completeZn-binding lipoprotein adcA-like protein2e-39162
NC_010079:2510951:2528387252838725299371551Staphylococcus aureus subsp. aureus USA300_TCH1516, completeABC superfamily ATP binding cassette transporter, binding protein2e-39162
NC_007793:2510801:2528237252823725297871551Staphylococcus aureus subsp. aureus USA300, complete genomeZn-binding lipoprotein adcA-like protein2e-39162
NC_002951:2448000:2464671246467124662211551Staphylococcus aureus subsp. aureus COL, complete genomeABC transporter, substrate-binding protein2e-39162
NC_007795:2455468:2475336247533624768861551Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein2e-39162
NC_003485:602640:6206476206476221941548Streptococcus pyogenes MGAS8232, complete genomeputative adhesion protein2e-39162
NC_008024:572916:5913695913695929161548Streptococcus pyogenes MGAS10750, complete genomeHigh-affinity zinc uptake system protein znuA precursor / hypothetical exported protein2e-39162
NC_008021:531730:5729235729235744701548Streptococcus pyogenes MGAS9429, complete genomehigh-affinity zinc uptake system protein znuA precursor2e-39162
NC_003923:2460130:2477566247756624791131548Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein1e-39162
NC_002745:2446722:2464159246415924657061548Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein1e-39162
NC_007622:2399347:2416977241697724185241548Staphylococcus aureus RF122, complete genomeprobable zinc-binding lipoprotein1e-39162
NC_013714:2086526:2146343214634321480221680Bifidobacterium dentium Bd1, complete genomesolute binding protein of ABC transporter system, YodA-like protein1e-39162
NC_013450:2463271:2480708248070824822551548Staphylococcus aureus subsp. aureus ED98, complete genomeABC transporter substrate-binding protein1e-39162
NC_016928:2411486:2429088242908824306351548Staphylococcus aureus subsp. aureus M013 chromosome, completeputative zinc-binding lipo protein ZinT1e-39162
NC_017351:2489460:2507495250749525090421548Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeperiplasmic solute binding family protein1e-39162
NC_017343:2367177:2387045238704523885921548Staphylococcus aureus subsp. aureus ECT-R 2, complete genomehypothetical protein1e-39162
NC_017338:2456000:2473193247319324747401548Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeABC superfamily ATP binding cassette transporter, binding protein1e-39162
NC_009632:2545419:2565237256523725667841548Staphylococcus aureus subsp. aureus JH1 chromosome, completeribulose-phosphate 3-epimerase1e-39162
NC_009782:2519379:2536816253681625383631548Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein1e-39162
NC_002758:2515310:2535178253517825367251548Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to Zn-binding lipoprotein adcA1e-39162
NC_002953:2435667:2456732245673224582821551Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative solute binding lipoprotein1e-39162
NC_017342:857630:8576308576308591771548Staphylococcus aureus subsp. aureus TCH60 chromosome, completeABC superfamily ATP binding cassette transporter, binding protein2e-39161
NC_002952:2550500:2569326256932625708731548Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative solute binding lipoprotein2e-39161
NC_009641:2513300:2533123253312325347181596Staphylococcus aureus subsp. aureus str. Newman chromosome,Zn-binding lipoprotein adcA-like protein1e-37156
UCMB5137:2128500:214879521487952149550756Bacillus atrophaeus UCMB-5137zinc-binding lipoprotein AdcA2e-35149