Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2059583 Escherichia coli HS, complete genome

Start: 2059583, End: 2060218, Length: 636

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:1967675:197848219784821979117636Escherichia coli B str. REL606 chromosome, complete genomeputative sulfite oxidase subunit YedZ1e-101369
AP010958:2272919:227963422796342280269636Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted inner membrane protein3e-100363
CU928160:2091249:210218921021892102824636Escherichia coli IAI1 chromosome, complete genomeheme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit3e-100363
CP002185:2181936:219189421918942192529636Escherichia coli W, complete genomeconserved inner membrane protein3e-100363
NC_009801:2159123:216994921699492170584636Escherichia coli E24377A, complete genomehypothetical protein3e-100363
CP002516:1902431:191332619133261913961636Escherichia coli KO11, complete genomeFerric reductase domain protein transmembrane component domain protein3e-100363
NC_011415:2248417:225842222584222259057636Escherichia coli SE11 chromosome, complete genomeputative sulfite oxidase subunit YedZ3e-100363
NC_011741:2091249:210218921021892102824636Escherichia coli IAI1 chromosome, complete genomeputative sulfite oxidase subunit YedZ3e-100363
NC_013353:2272919:227963422796342280269636Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein3e-100363
NC_016902:1902431:191332619133261913961636Escherichia coli KO11FL chromosome, complete genomeferric reductase domain-containing transmembrane protein3e-100363
NC_013364:2522888:253244225324422533077636Escherichia coli O111:H- str. 11128, complete genomehypothetical protein3e-100363
NC_000913:2028472:203850720385072039142636Escherichia coli K12, complete genomehypothetical protein1e-99362
NC_010473:2119480:212951521295152130150636Escherichia coli str. K-12 substr. DH10B, complete genomeconserved inner membrane protein1e-99362
AC_000091:2027648:204262020426202043255636Escherichia coli W3110 DNA, complete genomeconserved inner membrane protein1e-99362
NC_012759:1920955:193099019309901931625636Escherichia coli BW2952 chromosome, complete genomeputative sulfite oxidase subunit YedZ1e-99362
NC_010498:1210145:121828112182811218916636Escherichia coli SMS-3-5, complete genomehypothetical protein8e-100362
NC_016822:2201388:221706922170692217704636Shigella sonnei 53G, complete genomeputative sulfite oxidase subunit YedZ2e-99361
NC_002655:2730659:274023627402362740871636Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-99358
NC_002695:2655445:266502126650212665656636Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-99358
NC_011353:2563056:257263225726322573267636Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesulfite oxidase subunit YedZ9e-99358
NC_013008:2561586:257161325716132572248636Escherichia coli O157:H7 str. TW14359 chromosome, complete genomesulfite oxidase subunit YedZ9e-99358
NC_013941:2425233:243480924348092435444636Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein9e-99358
NC_007613:1038000:105206210520621052697636Shigella boydii Sb227, complete genomehypothetical protein2e-98357
NC_008563:2041345:204773220477322048367636Escherichia coli APEC O1, complete genomeYedZ2e-97354
NC_004431:2185750:219212121921212192756636Escherichia coli CFT073, complete genomehypothetical protein1e-91335
NC_004337:2035945:204260220426022043237636Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-91333
NC_004741:2009769:201927420192742019909636Shigella flexneri 2a str. 2457T, complete genomehypothetical protein5e-91333
NC_017328:2090679:209819920981992098834636Shigella flexneri 2002017 chromosome, complete genomemembrane protein yedZ5e-91333
NC_008253:1938975:194527619452761945911636Escherichia coli 536, complete genomehypothetical protein YedZ1e-90332
NC_008258:2045000:205126520512652051900636Shigella flexneri 5 str. 8401, complete genomehypothetical protein9e-90329
NC_012947:1769438:179312617931261793512387Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete1e-51202
NC_012947:1769438:179654917965491796854306Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completesulfite oxidase subunit YedZ2e-42172
NC_008228:2450700:245305624530562453703648Pseudoalteromonas atlantica T6c, complete genomeFerric reductase-like transmembrane component-like5e-39160
NC_009952:592000:616088616088616696609Dinoroseobacter shibae DFL 12, complete genomeputative sulfite oxidase subunit YedZ2e-24112
NC_015730:3853065:386836038683603868965606Roseobacter litoralis Och 149 chromosome, complete genomesulfoxide reductase heme-binding subunit YedZ2e-24112
NC_012968:1191037:119324111932411193906666Methylotenera mobilis JLW8, complete genomeFerric reductase domain protein transmembrane component domain6e-24110
NC_008209:695269:701807701807702412606Roseobacter denitrificans OCh 114, complete genomehypothetical protein2e-23108
NC_012483:3529895:353090435309043531524621Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein7e-23107
NC_008044:136844:143686143686144285600Silicibacter sp. TM1040, complete genomeFerric reductase-like transmembrane component-like1e-22106
NC_008686:50750:573245732457950627Paracoccus denitrificans PD1222 chromosome 1, complete sequenceFerric reductase domain protein transmembrane component, N-terminal domain3e-22104
NC_002696:2941644:296117629611762961937762Caulobacter crescentus CB15, complete genomehypothetical protein2e-21102
NC_011916:2967624:298715629871562987917762Caulobacter crescentus NA1000 chromosome, complete genomesulfite oxidase subunit YedZ2e-21102
NC_008009:1264791:127203312720331272647615Acidobacteria bacterium Ellin345, complete genomeFerric reductase-like transmembrane subunit4e-21101
NC_003911:3453764:346835934683593468955597Silicibacter pomeroyi DSS-3, complete genomehypothetical protein1e-20100
NC_011992:717107:721681721681722340660Acidovorax ebreus TPSY, complete genomeFerric reductase domain protein transmembrane component2e-2099
NC_008781:708811:709809709809710468660Polaromonas naphthalenivorans CJ2, complete genomeFerric reductase domain protein transmembrane component, N-terminal domain7e-2097.1
NC_008782:752686:755110755110755769660Acidovorax sp. JS42, complete genomeFerric reductase domain protein transmembrane component, N-terminal domain8e-2097.1
NC_020911:18500:215182151822135618Octadecabacter antarcticus 307, complete genomeputative ferric reductase-like transmembrane protein3e-1891.7
NC_020908:4263552:427707742770774277694618Octadecabacter arcticus 238, complete genomeputative ferric reductase-like transmembrane protein8e-1890.5
NC_009049:80184:866698666987274606Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceFerric reductase domain protein transmembrane component, N-terminal domain1e-1790.1
NC_020209:3797830:381038738103873811007621Pseudomonas poae RE*1-1-14, complete genomesulfite oxidase subunit YedZ2e-1789
NC_007802:4071006:408541340854134086015603Jannaschia sp. CCS1, complete genomeFerric reductase-like transmembrane component-like8e-1683.6
NC_015563:1172745:117373911737391174359621Delftia sp. Cs1-4 chromosome, complete genomesulfoxide reductase heme-binding subunit yedZ2e-1375.5
NC_018643:320197:331594331594332010417Alpha proteobacterium HIMB5 chromosome, complete genometransmembrane protein similar to ferric reductase, possible flavocytochrome6e-1373.9
NC_017192:683493:686518686518687069552Arcobacter sp. L, complete genomehypothetical protein1e-1169.7