Pre_GI: BLASTP Hits

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Query: NC_009800:2049346:2049346 Escherichia coli HS, complete genome

Start: 2049346, End: 2050266, Length: 921

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011741:2091249:209124920912492092169921Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-129461
NC_011415:2248417:224750822475082248428921Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-129461
NC_010498:1210145:122891112289111229831921Escherichia coli SMS-3-5, complete genomecarboxylate/amino acid/amine transporter2e-129461
CU928160:2091249:209124920912492092169921Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein2e-129461
AC_000091:2027648:203167620316762032596921Escherichia coli W3110 DNA, complete genomepredicted inner membrane protein7e-129460
NC_010473:2119480:211857121185712119491921Escherichia coli str. K-12 substr. DH10B, complete genomepredicted inner membrane protein7e-129460
NC_000913:2028472:202756320275632028483921Escherichia coli K12, complete genomepredicted inner membrane protein7e-129460
NC_009801:2159123:215912321591232160043921Escherichia coli E24377A, complete genomecarboxylate/amino acid/amine transporter7e-129460
NC_012759:1920955:192004619200461920966921Escherichia coli BW2952 chromosome, complete genomehypothetical protein7e-129460
NC_012947:1769438:180687818068781807798921Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein7e-129460
NC_013008:2561586:256067725606772561597921Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein7e-129460
CP002516:1902431:192390819239081924837930Escherichia coli KO11, complete genomecarboxylate/amino acid/amine transporter2e-128458
CP002185:2181936:218101821810182181947930Escherichia coli W, complete genomepredicted inner membrane protein2e-128458
NC_016902:1902431:192390819239081924837930Escherichia coli KO11FL chromosome, complete genomecarboxylate/amino acid/amine transporter2e-128458
NC_011740:1991941:199194119919411992861921Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative inner membrane protein2e-114412
NC_013716:2139952:214104121410412141961921Citrobacter rodentium ICC168, complete genomehypothetical protein2e-114412
NC_016810:2027311:203053720305372031457921Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-113409
NC_016856:2085283:208437420843742085294921Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-113409
NC_016863:2029340:203256620325662033486921Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-113409
NC_004631:948054:988990988990989910921Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-113409
NC_016832:948029:986665986665987585921Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,putative inner membrane transporter yedA2e-113409
NC_011149:1110642:113139511313951132315921Salmonella enterica subsp. enterica serovar Agona str. SL483,carboxylate/amino acid/amine transporter1e-113409
NC_017046:2026672:202989220298922030818927Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-113408
NC_016857:2027311:203053120305312031457927Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74inner membrane transporter yedA2e-113408
NC_011205:1227373:124520912452091246129921Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-113407
NC_016831:1865681:186568118656811866601921Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-113407
NC_015761:1970042:197327419732741974194921Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-112404
NC_016612:5208936:521028652102865211197912Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative DMT superfamily transporter inner membrane protein4e-103374
NC_015663:4906652:490774749077474908658912Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative DMT superfamily transporter inner membrane protein6e-103374
NC_021066:601029:619153619153620064912Raoultella ornithinolytica B6, complete genomeDMT superfamily transporter inner membrane protein9e-101366
NC_011283:1901229:192033319203331921244912Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-100365
NC_014306:3006028:300739930073993008316918Erwinia billingiae Eb661, complete genomecarboxylate/amino acid/amine transporter3e-90332
NC_016822:2201388:220579522057952206337543Shigella sonnei 53G, complete genomeputative DMT superfamily transporter inner membrane protein2e-79296
NC_016822:2201388:220541622054162205775360Shigella sonnei 53G, complete genomeputative DMT superfamily transporter inner membrane protein7e-32137
NC_008314:1955793:196031119603111961213903Ralstonia eutropha H16 chromosome 2, complete sequenceTransmembrane protein2e-25116
NC_014761:2248000:226086222608622261734873Oceanithermus profundus DSM 14977 chromosome, complete genomehypothetical protein3e-21102
NC_013132:3605317:360441936044193605336918Chitinophaga pinensis DSM 2588, complete genomeprotein of unknown function DUF6 transmembrane5e-1995.1
NC_014655:1098428:111623111162311117145915Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein2e-1686.7
NC_013947:1011899:1012447101244710140061560Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptide methionine sulfoxide reductase1e-1584.3
NC_015064:649201:652668652668653618951Acidobacterium sp. MP5ACTX9 chromosome, complete genomeprotein of unknown function DUF6 transmembrane9e-1477.8
NC_015589:2447132:246711424671142468061948Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehypothetical protein5e-1168.6
NC_014483:1376500:137660913766091377520912Paenibacillus polymyxa E681 chromosome, complete genomePermease of the drug/metabolite transporter (DMT) superfamily2e-0653.1