Pre_GI: BLASTP Hits

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Query: NC_009800:1254409:1275520 Escherichia coli HS, complete genome

Start: 1275520, End: 1275921, Length: 402

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:1477248:152191215219121522313402Escherichia coli O111:H- str. 11128, complete genomehypothetical protein8e-73271
NC_013361:1634226:165410016541001654501402Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein8e-73271
NC_012967:1205985:122723212272321227633402Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein8e-73271
NC_012947:2566754:256675425667542567155402Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completepeptidase domain protein8e-73271
NC_011415:1273551:129481512948151295216402Escherichia coli SE11 chromosome, complete genomehypothetical protein8e-73271
NC_010473:1245284:126653512665351266936402Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein1e-71267
NC_012759:1093764:111501511150151115416402Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-71267
NC_008563:1217804:123892812389281239329402Escherichia coli APEC O1, complete genomehypothetical protein1e-71267
NC_004431:1443968:146508514650851465486402Escherichia coli CFT073, complete genomeProtein ycgK precursor1e-71267
NC_007946:1280508:130052013005201300921402Escherichia coli UTI89, complete genomeprotein YcgK precursor1e-71267
NC_008253:1228485:124825312482531248654402Escherichia coli 536, complete genomeprotein YcgK precursor1e-71267
NC_011751:1446073:147334814733481473749402Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-71267
NC_011601:1315746:133433813343381334739402Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-71267
NC_011742:1221416:124254012425401242941402Escherichia coli S88 chromosome, complete genomehypothetical protein1e-71267
CP002185:1298675:131994013199401320341402Escherichia coli W, complete genomehypothetical protein2e-71266
NC_011748:1300863:132290513229051323306402Escherichia coli 55989, complete genomehypothetical protein2e-71266
CU928160:1232510:125377512537751254176402Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-71266
CU928145:1300863:132290513229051323306402Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-71266
AP010958:1339263:136052813605281360929402Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-71266
NC_009801:1296488:131775313177531318154402Escherichia coli E24377A, complete genomebacterial pre-peptidase C-terminal domain2e-71266
NC_011741:1232510:125377512537751254176402Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-71266
NC_013353:1339263:136052813605281360929402Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-71266
NC_011745:1287714:130760113076011308002402Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-67252
NC_011740:1831845:184056718405671840968402Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative exported protein3e-61233
NC_010067:1655815:167398016739801674381402Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-56217
NC_009524:1488714:150088915008891501212324Psychrobacter sp. PRwf-1 chromosome, complete genome1e-21102
NC_007493:628243:629873629873630277405Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceputative hypothetical Gifsy-1 prophage protein8e-0855.8
NC_015563:3786192:380037038003703800789420Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein1e-0755.5
NC_011958:735755:785751785751786155405Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical Gifsy-1 prophage protein precursor5e-0753.1