Pre_GI: BLASTP Hits

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Query: NC_009800:1254409:1272728 Escherichia coli HS, complete genome

Start: 1272728, End: 1272994, Length: 267

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:2786000:278845127884512788717267Escherichia coli KO11FL chromosome, complete genomecell division topological specificity factor MinE2e-44177
NC_007946:1280508:129771112977111297977267Escherichia coli UTI89, complete genomecell division topological specificity factor MinE2e-44177
CU928160:1232510:125096612509661251232267Escherichia coli IAI1 chromosome, complete genomecell division topological specificity factor2e-44177
NC_008253:1228485:124546112454611245727267Escherichia coli 536, complete genomecell division topological specificity factor2e-44177
NC_010468:2699000:270105127010512701317267Escherichia coli ATCC 8739, complete genomecell division topological specificity factor MinE2e-44177
AP010958:1339263:135771913577191357985267Escherichia coli O103:H2 str. 12009 DNA, complete genomecell division topological specificity factor MinE2e-44177
CP002185:1298675:131713113171311317397267Escherichia coli W, complete genomecell division topological specificity factor2e-44177
CP002516:2786000:278845127884512788717267Escherichia coli KO11, complete genomecell division topological specificity factor MinE2e-44177
NC_010473:1245284:126374312637431264009267Escherichia coli str. K-12 substr. DH10B, complete genomecell division topological specificity factor2e-44177
NC_009801:1296488:131494413149441315210267Escherichia coli E24377A, complete genomecell division topological specificity factor MinE2e-44177
NC_008563:1217804:123611912361191236385267Escherichia coli APEC O1, complete genomecell division topological specificity factor MinE2e-44177
NC_011751:1446073:147055614705561470822267Escherichia coli UMN026 chromosome, complete genomecell division topological specificity factor MinE2e-44177
CU928145:1300863:132009613200961320362267Escherichia coli 55989 chromosome, complete genomecell division topological specificity factor2e-44177
NC_010498:1995500:199716919971691997435267Escherichia coli SMS-3-5, complete genomecell division topological specificity factor MinE2e-44177
NC_004431:1443968:146227614622761462542267Escherichia coli CFT073, complete genomecell division topological specificity factor MinE2e-44177
NC_011748:1300863:132009613200961320362267Escherichia coli 55989, complete genomecell division topological specificity factor MinE2e-44177
NC_013941:1460144:147950714795071479773267Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecell division topological specificity factor2e-44177
NC_013364:1477248:151912015191201519386267Escherichia coli O111:H- str. 11128, complete genomecell division topological specificity factor MinE2e-44177
NC_013361:1634226:165130816513081651574267Escherichia coli O26:H11 str. 11368 chromosome, complete genomecell division topological specificity factor MinE2e-44177
NC_013353:1339263:135771913577191357985267Escherichia coli O103:H2 str. 12009, complete genomecell division topological specificity factor MinE2e-44177
NC_012967:1205985:122444012244401224706267Escherichia coli B str. REL606 chromosome, complete genomecell division topological specificity factor MinE2e-44177
NC_012947:2566754:256968125696812569947267Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecell division topological specificity factor MinE2e-44177
NC_012759:1093764:111222311122231112489267Escherichia coli BW2952 chromosome, complete genomecell division topological specificity factor MinE2e-44177
NC_011745:1287714:130479213047921305058267Escherichia coli ED1a chromosome, complete genomecell division topological specificity factor MinE2e-44177
NC_011742:1221416:123973112397311239997267Escherichia coli S88 chromosome, complete genomecell division topological specificity factor MinE2e-44177
NC_011741:1232510:125096612509661251232267Escherichia coli IAI1 chromosome, complete genomecell division topological specificity factor MinE2e-44177
NC_011601:1315746:133154613315461331812267Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomecell division topological specificity factor MinE2e-44177
NC_011415:1273551:129200612920061292272267Escherichia coli SE11 chromosome, complete genomecell division topological specificity factor MinE2e-44177
NC_010658:1193225:121160712116071211873267Shigella boydii CDC 3083-94, complete genomecell division topological specificity factor MinE2e-44177
NC_015663:4767443:479627547962754796544270Enterobacter aerogenes KCTC 2190 chromosome, complete genomecell division topological specificity factor MinE2e-42171
NC_020181:734477:738246738246738515270Enterobacter aerogenes EA1509E, complete genomeCell division topological specificity factor MinE2e-42171
NC_013282:2582720:259924525992452599511267Cronobacter turicensis, complete genomeCell division topological specificity factor2e-41167
NC_020211:2985157:300505930050593005328270Serratia marcescens WW4, complete genomecell division topological specificity factor1e-34144
NC_008463:1912348:191454519145451914799255Pseudomonas aeruginosa UCBPP-PA14, complete genomecell division topological specificity factor1e-21102
NC_009092:2529518:254517125451712545431261Shewanella loihica PV-4, complete genomecell division topological specificity factor MinE7e-2095.9
NC_015556:1899850:191471419147141914968255Pseudomonas fulva 12-X chromosome, complete genomeCell division topological specificity factor4e-1786.7
NC_005773:1851116:186580718658071866061255Pseudomonas syringae pv. phaseolicola 1448A, complete genomecell division topological specificity factor MinE4e-1786.7
NC_014752:98117:115215115215115478264Neisseria lactamica ST-640, complete genomecell division topological specificity factor3e-1683.6
NC_008767:136958:154596154596154859264Neisseria meningitidis FAM18, complete genomeputative cell division topological specificity factor5e-1683.2
NC_003112:149593:166905166905167168264Neisseria meningitidis MC58, complete genomecell division topological specificity factor5e-1683.2
NC_010120:2029880:203478720347872035050264Neisseria meningitidis 053442, complete genomecell division topological specificity factor5e-1683.2
NC_013016:2014368:201936520193652019628264Neisseria meningitidis alpha14 chromosome, complete genomecell division topological specificity factor MinE5e-1683.2
NC_017501:147933:165991165991166254264Neisseria meningitidis 8013, complete genomeseptum formation topological specificity factor MinE5e-1683.2
NC_017505:148644:165970165970166233264Neisseria meningitidis alpha710 chromosome, complete genomeputative cell division topological specificity factor5e-1683.2
NC_017512:2087098:209309920930992093362264Neisseria meningitidis WUE 2594, complete genomeseptum formation topological specificity factor MinE5e-1683.2
NC_017513:141291:158929158929159192264Neisseria meningitidis G2136 chromosome, complete genomecell division topological specificity factor MinE5e-1683.2
NC_003116:93576:995779957799840264Neisseria meningitidis Z2491, complete genomecell division topological specificity factor5e-1683.2
NC_017518:150991:168317168317168580264Neisseria meningitidis NZ-05/33 chromosome, complete genomecell division topological specificity factor MinE5e-1683.2
NC_017517:153379:170394170394170657264Neisseria meningitidis M01-240355 chromosome, complete genomecell division topological specificity factor MinE5e-1683.2
NC_017516:149657:166967166967167230264Neisseria meningitidis H44/76 chromosome, complete genomecell division topological specificity factor MinE5e-1683.2
NC_017515:155634:172949172949173212264Neisseria meningitidis M04-240196 chromosome, complete genomecell division topological specificity factor MinE5e-1683.2
NC_017514:2096452:210145021014502101713264Neisseria meningitidis M01-240149 chromosome, complete genomecell division topological specificity factor MinE5e-1683.2
NC_002946:1786000:179118917911891791452264Neisseria gonorrhoeae FA 1090, complete genomeMinE3e-1580.5
NC_017511:1936331:195595019559501956207258Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomecell division topological specificity factor MinE2e-1477.4
NC_011035:2027916:204753520475352047792258Neisseria gonorrhoeae NCCP11945 chromosome, complete genomecell division topological specificity factor MinE2e-1477.4
NC_015381:992401:992401992401992655255Burkholderia gladioli BSR3 chromosome 1, complete sequencecell division topological specificity factor6e-1372.8
NC_009074:2914053:291639929163992916653255Burkholderia pseudomallei 668 chromosome I, complete sequencecell division topological specificity factor MinE2e-1271.2
NC_007513:1764739:178632017863201786607288Synechococcus sp. CC9902, complete genomeSeptum formation topological specificity factor MinE6e-0959.7