Pre_GI: BLASTP Hits

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Query: NC_009800:1254409:1271439 Escherichia coli HS, complete genome

Start: 1271439, End: 1271612, Length: 174

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011415:1273551:129071612907161290889174Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-24110
NC_010498:1995500:199854619985461998719174Escherichia coli SMS-3-5, complete genomehypothetical protein3e-21100
NC_007946:1280508:129642112964211296594174Escherichia coli UTI89, complete genomehypothetical protein7e-2199
NC_012759:1093764:111093411109341111107174Escherichia coli BW2952 chromosome, complete genomehypothetical protein3e-24110
NC_010473:1245284:126245412624541262627174Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein3e-24110
NC_011601:1315746:133025813302581330431174Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein7e-2199
NC_013941:1460144:147525314752531475426174Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-24110
CP002516:2786000:278983427898342790007174Escherichia coli KO11, complete genomehypothetical protein3e-24110
NC_008253:1228485:124417112441711244344174Escherichia coli 536, complete genomehypothetical protein3e-21100
NC_016902:2786000:278983427898342790007174Escherichia coli KO11FL chromosome, complete genomehypothetical protein3e-24110
NC_009801:1296488:131365413136541313827174Escherichia coli E24377A, complete genomehypothetical protein3e-24110
NC_011750:1978801:197954619795461979719174Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-21100
NC_004431:1443968:146098614609861461159174Escherichia coli CFT073, complete genomehypothetical protein5e-2096.3