Pre_GI: BLASTP Hits

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Query: NC_009800:1254409:1269778 Escherichia coli HS, complete genome

Start: 1269778, End: 1270671, Length: 894

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000913:1188999:1218824121882412214452622Escherichia coli K12, complete genome9e-173605
NC_010473:1245284:1259065125906512616862622Escherichia coli str. K-12 substr. DH10B, complete genome9e-173605
NC_000913:1188999:1220429122042912214451017Escherichia coli K12, complete genome7e-168589
NC_013353:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009, complete genomeAidA-I adhesin-like protein2e-159561
CP002185:1298675:1312778131277813150992322Escherichia coli W, complete genome2e-159561
AP010958:1339263:1353366135336613556872322Escherichia coli O103:H2 str. 12009 DNA, complete genomeAidA-I adhesin-like protein2e-159561
NC_011741:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative outer membrane autotransporter barrel pectin lyase fold2e-159561
CU928160:1232510:1246613124661312489342322Escherichia coli IAI1 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold2e-159561
NC_013361:1634226:1646955164695516492762322Escherichia coli O26:H11 str. 11368 chromosome, complete genomeAidA-I adhesin5e-159560
NC_011750:1978801:1980462198046219831102649Escherichia coli IAI39 chromosome, complete genomeputative outer membrane autotransporter barrel, putative pectin lyase fold3e-159560
NC_010498:1995500:1999462199946220017832322Escherichia coli SMS-3-5, complete genomeautotransporter (AT) family porin1e-158559
NC_011415:1273551:1287653128765312899742322Escherichia coli SE11 chromosome, complete genomeputative autotransporter1e-158559
CU928145:1300863:1315755131575513180642310Escherichia coli 55989 chromosome, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold1e-158558
NC_011748:1300863:1315755131575513180642310Escherichia coli 55989, complete genomeputative Outer membrane autotransporter barrel, putative pectin lyase fold1e-158558
NC_011751:1446073:1466883146688314685321650Escherichia coli UMN026 chromosome, complete genomehypothetical protein7e-158556
NC_009801:1296488:131199213119921312912921Escherichia coli E24377A, complete genomeporin, autotransporter (AT) family2e-154544
NC_010658:1193225:120892712089271209847921Shigella boydii CDC 3083-94, complete genome1e-153541
NC_011740:1831845:1835772183577218385102739Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative exported protein2e-143508
NC_010468:2699000:2704151270415127067712621Escherichia coli ATCC 8739, complete genome4e-130464
NC_014618:2788533:2800332280033228046994368Enterobacter cloacae SCF1 chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein8e-79293
NC_009425:1:1047210472152564785Enterobacter sp. 638 plasmid pENTE01, complete sequenceouter membrane autotransporter9e-75280
NC_008150:3711953:37119533711953372307011118Yersinia pestis Antiqua, complete genomeputative autotransporter protein1e-73276
NC_008149:3648139:36716853671685368280211118Yersinia pestis Nepal516, complete genomeautotransporter protein1e-73276
NC_017154:848500:87203687203688315311118Yersinia pestis D106004 chromosome, complete genomeputative autotransporter protein1e-73276
NC_017168:4509918:45280984528098453921511118Yersinia pestis A1122 chromosome, complete genomeputative autotransporter protein1e-73276
NC_010465:804249:80424980424981718712939Yersinia pseudotuberculosis YPIII, complete genomeouter membrane autotransporter barrel domain protein1e-73276
NC_010498:2555706:2556284255628425641977914Escherichia coli SMS-3-5, complete genomeouter membrane autotransporter1e-69263
NC_013716:2898434:2911789291178929146982910Citrobacter rodentium ICC168, complete genomeputative outer membrane autotransporter3e-69261
CU928160:1579375:1602899160289916083195421Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative exported protein1e-68260
NC_011741:1579375:1602899160289916083195421Escherichia coli IAI1 chromosome, complete genomeputative lipoprotein/autotransporter domain-containing protein1e-68260
NC_010468:2345781:2345781234578123512015421Escherichia coli ATCC 8739, complete genomeouter membrane autotransporter barrel domain protein7e-69260
NC_009425:1:787848174740Enterobacter sp. 638 plasmid pENTE01, complete sequenceouter membrane autotransporter1e-68259
CP002516:2395578:2395578239557824009985421Escherichia coli KO11, complete genomeouter membrane autotransporter barrel domain protein4e-68258
NC_016902:2395578:2395578239557824009985421Escherichia coli KO11FL chromosome, complete genomeouter membrane autotransporter barrel domain-containing protein4e-68258
NC_009800:1589000:1609488160948816149085421Escherichia coli HS, complete genome4e-68258
NC_020063:2230000:2249441224944122548615421Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane autotransporter barrel domain-containing protein4e-68258
NC_010473:1661000:1680314168031416817141401Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein3e-68258
AC_000091:1574000:1594379159437915957791401Escherichia coli W3110 DNA, complete genome3e-68258
NC_000913:1570431:1590689159068915920891401Escherichia coli K12, complete genomeconserved protein, predicted pseudogene3e-68258
NC_012759:1462490:1482748148274814841481401Escherichia coli BW2952 chromosome, complete genomehypothetical protein3e-68258
NC_012967:1546000:1569232156923215706321401Escherichia coli B str. REL606 chromosome, complete genome3e-68258
NC_012947:2228235:2230071223007122316211551Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane autotransporter barrel domain protein2e-68258
NC_002655:1966464:1970492197049219718921401Escherichia coli O157:H7 EDL933, complete genomeputative ATP-binding component of a transport system and adhesin protein2e-68258
CP002185:1681327:1704944170494417102775334Escherichia coli W, complete genomepredicted lipoprotein2e-66252
NC_012125:3879917:3888198388819838909212724Salmonella enterica subsp. enterica serovar Paratyphi C strainautotransported protein1e-65249
NC_016863:3905875:3916060391606039189272868Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative autotransporter2e-65249
NC_011149:3863913:3879256387925638821232868Salmonella enterica subsp. enterica serovar Agona str. SL483,outer membrane autotransporter barrel domain3e-65248
NC_016860:3964000:3977717397771739805242808Salmonella enterica subsp. enterica serovar Typhimurium strputative autotransported protein3e-65248
NC_004431:2747237:274781527478152748690876Escherichia coli CFT073, complete genomeHypothetical protein ydeU3e-63241
NC_016816:3333000:3357378335737833603352958Pantoea ananatis LMG 5342, complete genomeType V secretory pathway, adhesin AidA4e-63241
NC_010067:2304313:2326436232643623288502415Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-63240
NC_015663:2807574:2829400282940028361616762Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-62238
NC_012967:3769499:3788241378824137917383498Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-58225
NC_012947:44512:5269952699561963498Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane autotransporter barrel domain protein3e-58225
NC_013364:1477248:1514816151481615165671752Escherichia coli O111:H- str. 11128, complete genome2e-54213
NC_013364:1477248:151671715167171517088372Escherichia coli O111:H- str. 11128, complete genome2e-53209
NC_011745:1287714:130223113022311302758528Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-51202
NC_004431:1443968:145971614597161460243528Escherichia coli CFT073, complete genomehypothetical protein4e-51201
NC_011742:1221416:123717112371711237698528Escherichia coli S88 chromosome, complete genomehypothetical protein4e-51201
NC_008563:1217804:123355912335591234086528Escherichia coli APEC O1, complete genomehypothetical protein4e-51201
NC_007946:1280508:129515112951511295678528Escherichia coli UTI89, complete genomehypothetical protein4e-51201
NC_008253:1228485:124290112429011243428528Escherichia coli 536, complete genomepart of hypothetical protein b1170 (putative autotransporter)8e-51200
NC_012751:275336:2828972828972850412145Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completetype V secretory pathway, adhesin2e-46186
NC_015224:3892972:3919019391901939219642946Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative pertactin family virulence factor/autotransporter3e-40165
NC_015224:3892972:3923126392312639244001275Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,type V secretory pathway, adhesin AidA1e-35150
NC_013364:2898964:2923885292388529276193735Escherichia coli O111:H- str. 11128, complete genomeadhesin YfaL4e-25115
NC_012751:1190206:119737711973771197901525Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completetype V secretory pathway, adhesin2e-21103
NC_014752:324832:3417823417823438992118Neisseria lactamica ST-640, complete genomeouter membrane autotransporter1e-1377.4
NC_010658:1593137:160941416094141609809396Shigella boydii CDC 3083-94, complete genome1e-1170.5
NC_005085:2014987:2039099203909920416722574Chromobacterium violaceum ATCC 12472, complete genomeprobable ATP-binding component of a transport system2e-0860.1
NC_009672:30000:3346233462390475586Ochrobactrum anthropi ATCC 49188 plasmid pOANT04, completeouter membrane autotransporter4e-0652.4
NC_013515:1321336:1335786133578613383772592Streptobacillus moniliformis DSM 12112, complete genomeouter membrane autotransporter barrel domain protein1e-0551.2