Pre_GI: BLASTP Hits

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Query: NC_009800:1254409:1265197 Escherichia coli HS, complete genome

Start: 1265197, End: 1265445, Length: 249

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:2786000:279600127960012796249249Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-41167
NC_011748:1300863:131178713117871312035249Escherichia coli 55989, complete genomehypothetical protein2e-41167
NC_000913:1188999:121597112159711216219249Escherichia coli K12, complete genomehypothetical protein2e-41167
NC_010473:1245284:125621212562121256460249Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein2e-41167
NC_009801:1296488:130741213074121307660249Escherichia coli E24377A, complete genomehypothetical protein2e-41167
AC_000091:1191353:121832512183251218573249Escherichia coli W3110 DNA, complete genomehypothetical protein2e-41167
CP002185:1298675:130959913095991309847249Escherichia coli W, complete genomehypothetical protein2e-41167
NC_010468:2699000:270937627093762709624249Escherichia coli ATCC 8739, complete genomehypothetical protein2e-41167
AP010958:1339263:135018713501871350435249Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-41167
CU928145:1300863:131178713117871312035249Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-41167
CP002516:2786000:279600127960012796249249Escherichia coli KO11, complete genomeuncharacterized protein YmgC2e-41167
NC_013941:1460144:146901314690131469261249Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-41167
NC_013364:1477248:151158915115891511837249Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-41167
NC_013361:1634226:164377616437761644024249Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-41167
NC_013353:1339263:135018713501871350435249Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-41167
NC_012967:1205985:121690912169091217157249Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-41167
NC_012947:2566754:257723025772302577478249Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-41167
NC_012759:1093764:110469211046921104940249Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-41167
NC_011415:1273551:128447412844741284722249Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-41167
NC_008253:1228485:123972212397221239970249Escherichia coli 536, complete genomehypothetical protein YmgC7e-41165
NC_011601:1315746:132581113258111326059249Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein7e-41165
NC_011742:1221416:123399212339921234240249Escherichia coli S88 chromosome, complete genomehypothetical protein7e-41165
NC_011745:1287714:129905312990531299301249Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-41165
NC_011751:1446073:146301314630131463261249Escherichia coli UMN026 chromosome, complete genomehypothetical protein6e-41165
NC_011741:1232510:124343412434341243682249Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-40163
CU928160:1232510:124343412434341243682249Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein3e-40163
NC_011750:1978801:198704419870441987280237Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-38156
NC_010498:1995500:200471520047152004891177Escherichia coli SMS-3-5, complete genomehypothetical protein7e-25112