Pre_GI: BLASTP Hits

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Query: NC_009792:714953:734440 Citrobacter koseri ATCC BAA-895, complete genome

Start: 734440, End: 735423, Length: 984

Host Lineage: Citrobacter koseri; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter koseri ATCC BAA-895 is a clinical isolate from a human infant. Causative agent of neonatal meningitis. Citrobacter koseri, previously known as Citrobacter diversus, Levinea diversus or Levinea malonatica resides in a wide range of environments, including soil, water and food products. It is an occasional inhabitant of human and animal intestines, but is mainly characterized as being a causative agent of neonatal meningitis with an extreme high rate of multiple brain abscess initiations and a concomitant high moratility rate. The bacteria are used in neonatal rat models to study the mechanism of blood-brain barrier penetration, host immune response evasion and its resistance to phagocytotic killing.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:2255102:226001822600182261004987Citrobacter rodentium ICC168, complete genomechain length determinant protein8e-122436
NC_011740:2135141:213514121351412136121981Escherichia fergusonii ATCC 35469, complete genomeChain length determinant protein (Polysaccharide antigen chain regulator)5e-117421
NC_011094:2172271:217611021761102177093984Salmonella enterica subsp. enterica serovar Schwarzengrund strchain length determinant protein1e-115416
CP002516:1846492:186895318689531869930978Escherichia coli KO11, complete genomelipopolysaccharide biosynthesis protein2e-114412
CP002185:2233732:223592522359252236902978Escherichia coli W, complete genomeO6 antigen polymerase (periplasm)2e-114412
NC_016902:1846492:186895318689531869930978Escherichia coli KO11FL chromosome, complete genomelipopolysaccharide biosynthesis protein2e-114412
NC_011745:2302979:2306833230683323078671035Escherichia coli ED1a chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains7e-112403
NC_011415:2346474:235139523513952352372978Escherichia coli SE11 chromosome, complete genomeO-antigen chain length determinant protein7e-112403
NC_011601:2211917:221586022158602216837978Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains7e-111400
NC_011748:2324495:232835023283502329330981Escherichia coli 55989, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-110399
CU928145:2324495:232835023283502329330981Escherichia coli 55989 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-110399
NC_010658:1090104:1113117111311711141511035Shigella boydii CDC 3083-94, complete genomechain length determinant protein4e-110398
NC_011080:2161696:216553421655342166517984Salmonella enterica subsp. enterica serovar Newport str. SL254,chain length determinant protein7e-110397
NC_011751:2395882:239982223998222400802981Escherichia coli UMN026 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-109396
NC_002655:2839600:2839600283960028406131014Escherichia coli O157:H7 EDL933, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-109395
NC_002695:2769387:276938727693872770367981Escherichia coli O157:H7 str. Sakai, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains3e-109395
NC_009801:2276131:2279985227998522810191035Escherichia coli E24377A, complete genomechain length determinant protein3e-109395
NC_007613:864084:8668718668718679051035Shigella boydii Sb227, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains7e-109394
NC_008253:2134110:213567721356772136654978Escherichia coli 536, complete genomechain length determinant protein5e-109394
NC_011294:2156425:216026121602612161244984Salmonella enterica subsp. enterica serovar Enteritidis strpolysaccharide chain length regulator5e-109394
CU928160:2155947:216070821607082161688981Escherichia coli IAI1 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains4e-109394
NC_011741:2155947:216070821607082161688981Escherichia coli IAI1 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains4e-109394
NC_007606:1999870:2018463201846320194971035Shigella dysenteriae Sd197, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-108393
NC_011742:2093503:209743220974322098409978Escherichia coli S88 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains9e-109393
NC_008258:2100646:2105659210565921066721014Shigella flexneri 5 str. 8401, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains8e-109393
NC_004337:2098736:2103749210374921047621014Shigella flexneri 2a str. 301, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains8e-109393
NC_004741:2081649:2086662208666220876751014Shigella flexneri 2a str. 2457T, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains8e-109393
NC_017328:2153083:2158096215809621591091014Shigella flexneri 2002017 chromosome, complete genomeChain length determinant protein8e-109393
NC_004431:2383901:2385469238546923864821014Escherichia coli CFT073, complete genomeChain length determinant protein8e-109393
NC_007946:2231872:2235818223581822368311014Escherichia coli UTI89, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains8e-109393
NC_011149:2110861:211469921146992115682984Salmonella enterica subsp. enterica serovar Agona str. SL483,chain length determinant protein3e-108392
NC_011353:2734222:273422227342222735199978Escherichia coli O157:H7 str. EC4115 chromosome, complete genomechain length determinant protein2e-108392
NC_013008:2733203:273320327332032734180978Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-108392
NC_013361:2848949:285114628511462852123978Escherichia coli O26:H11 str. 11368 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-108392
NC_003198:2109775:211361321136132114596984Salmonella enterica subsp. enterica serovar Typhi str. CT18,polysaccharide chain length regulator3e-108391
NC_004631:862002:889332889332890315984Salmonella enterica subsp. enterica serovar Typhi Ty2, completepolysaccharide chain length regulator3e-108391
NC_016832:861956:889286889286890269984Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Chain length determinant protein3e-108391
NC_003197:2152994:215683221568322157815984Salmonella typhimurium LT2, complete genomelipopolysaccharide O-antigen chain length regulator3e-108391
NC_011205:2283438:228727622872762288259984Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853chain length determinant protein3e-108391
NC_016810:2150709:215454721545472155530984Salmonella enterica subsp. enterica serovar Typhimurium strpolysaccharide chain length regulator3e-108391
NC_016856:2204546:220838422083842209367984Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Slipopolysaccharide O-antigen chain length regulator3e-108391
NC_016857:2150709:215454721545472155530984Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74lipopolysaccharide O-antigen chain length regulator3e-108391
NC_016860:2148535:215237321523732153356984Salmonella enterica subsp. enterica serovar Typhimurium strchain length determinant protein3e-108391
NC_016863:2152739:215657721565772157560984Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1lipopolysaccharide O-antigen chain length regulator3e-108391
NC_010498:1035406:105479910547991055779981Escherichia coli SMS-3-5, complete genomechain length determinant protein1e-107390
NC_011750:1034919:105902410590241060004981Escherichia coli IAI39 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-107390
NC_008563:2182270:2186123218612321871391017Escherichia coli APEC O1, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-107390
NC_011274:2147427:215126321512632152246984Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91polysaccharide chain length regulator7e-108390
NC_006905:2175361:2178135217813521791721038Salmonella enterica subsp. enterica serovar Choleraesuis strregulator of length of O-antigen component of lipopolysaccharide chains7e-108390
AP010958:2504072:250792525079252508902978Escherichia coli O103:H2 str. 12009 DNA, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-107389
NC_013353:2504072:250792525079252508902978Escherichia coli O103:H2 str. 12009, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-107389
NC_010102:861860:887990887990888967978Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-107388
NC_012967:2025127:202732320273232028306984Escherichia coli B str. REL606 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains3e-107388
NC_011083:2200613:220445122044512205428978Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,chain length determinant protein5e-107387
NC_017046:2150072:215391021539102154887978Salmonella enterica subsp. enterica serovar Typhimurium str. 798polysaccharide chain length regulator5e-107387
NC_012947:1720732:174570417457041746684981Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelipopolysaccharide biosynthesis protein4e-107387
NC_016831:854973:882311882311883288978Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpolysaccharide chain length regulator1e-106386
NC_012125:1693774:171410117141011715078978Salmonella enterica subsp. enterica serovar Paratyphi C strainpolysaccharide chain length regulator3e-106385
AC_000091:2096672:209945820994582100438981Escherichia coli W3110 DNA, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains6e-106384
NC_000913:2092559:209534520953452096325981Escherichia coli K12, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains6e-106384
NC_010473:2183567:218635321863532187333981Escherichia coli str. K-12 substr. DH10B, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains6e-106384
NC_012759:1983975:198782819878281988808981Escherichia coli BW2952 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains6e-106384
NC_010468:1775000:179707217970721798052981Escherichia coli ATCC 8739, complete genomelipopolysaccharide biosynthesis protein5e-106384
NC_011147:854730:881987881987882964978Salmonella enterica subsp. enterica serovar Paratyphi A strpolysaccharide chain length regulator2e-105382
NC_006511:854785:887812887812888789978Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpolysaccharide chain length regulator2e-105382
NC_013941:2544569:2549493254949325505301038Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeO-antigen chain length determinant Wzz3e-105382
NC_010067:807129:825425825425826408984Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-104377
NC_015761:2062345:206619920661992067182984Salmonella bongori NCTC 12419, complete genomepolysaccharide chain length regulator8e-103373
NC_014121:3399685:340348234034823404462981Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completechain length determinant protein2e-97355
NC_013364:2672837:267558426755842676567984Escherichia coli O111:H- str. 11128, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains5e-97354
NC_013282:2827757:2832655283265528336651011Cronobacter turicensis, complete genomeChain length determinant protein6e-96350
NC_016514:3048883:305373930537393054719981Enterobacter cloacae EcWSU1 chromosome, complete genomechain length determinant protein3e-95348
NC_020063:1659795:168299716829971683974978Enterobacteriaceae bacterium strain FGI 57, complete genomechain length determinant protein4e-94344
NC_009778:1141716:1161724116172411627341011Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-94344
NC_020260:1184174:120322312032231204215993Cronobacter sakazakii Sp291, complete genomechain length determinant protein WzzB5e-94344
NC_009436:2836847:283684728368472837845999Enterobacter sp. 638, complete genomelipopolysaccharide biosynthesis protein2e-89329
NC_016816:1676460:1702320170232017033241005Pantoea ananatis LMG 5342, complete genomepolysaccharide antigen chain regulator1e-52206
NC_007712:4067500:4088895408889540899471053Sodalis glossinidius str. 'morsitans', complete genomeputative lipopolysaccharide biosynthesis protein6e-1375.1
NC_012691:2225000:2243045224304522441631119Tolumonas auensis DSM 9187, complete genomelipopolysaccharide biosynthesis protein2e-1170.5
NC_006300:600516:6071416071416083311191Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein1e-0964.3
NC_009655:866281:8730508730508740901041Actinobacillus succinogenes 130Z chromosome, complete genomelipopolysaccharide biosynthesis protein9e-0754.7
NC_010939:1633000:1638201163820116393131113Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeWzz-like protein1e-0654.3