Pre_GI: BLASTN Hits

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Query: NC_009749:937412 Francisella tularensis subsp. holarctica FTA, complete genome

Start: 937412, End: 956835, Length: 19424

Host Lineage: Francisella tularensis; Francisella; Francisellaceae; Thiotrichales; Proteobacteria; Bacteria

General Information: Isolated from an immunocompetent 56-year old male with bacteremic pneumonia in France. Francisella tularensis is a non-motile, aerobic, rod-shaped Gram-negative bacterium and is the causative agent of tularemia. This organism was first identified by Edward Francis as the causative agent of a plague-like illness that affected squirrels in Tulare county in California in the early part of the 20th century. The organism now bears his name. The disease, which has been noted throughout recorded history, can be transmitted to humans by infected ticks or deerflies, infected meat, or by aerosol, and thus is a potential bioterrorism agent. This organism has a high infectivity rate, and can invade phagocytic and nonphagocytic cells, multiplying rapidly. Once within a macrophage, the organism can escape the phagosome and live in the cytosol. It is an aquatic organism, and can be found living inside protozoans, similar to what is observed with Legionella.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007880:935670*93567095713021461Francisella tularensis subsp. holarctica, complete genome010760BLASTN svgBLASTP svg
NC_008245:324926*32492635809933174Francisella tularensis subsp. tularensis FSC 198, complete genome01739BLASTN svgBLASTP svg
NC_008245:141982*14198217415532174Francisella tularensis subsp. tularensis FSC 198, complete genome01739BLASTN svgBLASTP svg
NC_006570:324974*32497435814633173Francisella tularensis subsp. tularensis Schu 4, complete genome01739BLASTN svgBLASTP svg
NC_006570:141966*14196617413932174Francisella tularensis subsp. tularensis Schu 4, complete genome01739BLASTN svgBLASTP svg
NC_008245:1525877*1525877155460728731Francisella tularensis subsp. tularensis FSC 198, complete genome01727BLASTN svgBLASTP svg
NC_006570:1526071*1526071154588919819Francisella tularensis subsp. tularensis Schu 4, complete genome01727BLASTN svgBLASTP svg
NC_008245:17946291794629181759922971Francisella tularensis subsp. tularensis FSC 198, complete genome01725BLASTN svgBLASTP svg
NC_008245:1405000*1405000142332918330Francisella tularensis subsp. tularensis FSC 198, complete genome01725BLASTN svgBLASTP svg
NC_006570:17948321794832181779222961Francisella tularensis subsp. tularensis Schu 4, complete genome01725BLASTN svgBLASTP svg
NC_006570:1405178*1405178142352318346Francisella tularensis subsp. tularensis Schu 4, complete genome01725BLASTN svgBLASTP svg
NC_010677:707881*70788173076722887Francisella tularensis subsp. mediasiatica FSC147, complete genome0769BLASTN svgBLASTP svg
NC_010677:12960001296000131657620577Francisella tularensis subsp. mediasiatica FSC147, complete genome0769BLASTN svgBLASTP svg
NC_010677:214712*21471224609931388Francisella tularensis subsp. mediasiatica FSC147, complete genome0767BLASTN svgBLASTP svg
NC_010677:17840001784000180493420935Francisella tularensis subsp. mediasiatica FSC147, complete genome0767BLASTN svgBLASTP svg
NC_010677:1621500*1621500165903737538Francisella tularensis subsp. mediasiatica FSC147, complete genome0761BLASTN svgBLASTP svg
NC_010677:456277*45627747729321017Francisella tularensis subsp. mediasiatica FSC147, complete genome0712BLASTN svgBLASTP svg
NC_008369:1083598*1083598110999126394Francisella tularensis subsp. holarctica OSU18, complete genome01774BLASTN svgBLASTP svg
NC_007880:1456705*1456705148081024106Francisella tularensis subsp. holarctica, complete genome01780BLASTN svgBLASTP svg
NC_007880:1703346*1703346176005556710Francisella tularensis subsp. holarctica, complete genome01788BLASTN svgBLASTP svg
NC_008369:939356*93935695877619421Francisella tularensis subsp. holarctica OSU18, complete genome010740BLASTN svgBLASTP svg
NC_008245:529378*52937855441325036Francisella tularensis subsp. tularensis FSC 198, complete genome06962BLASTN svgBLASTP svg
NC_006570:529426*52942655446125036Francisella tularensis subsp. tularensis Schu 4, complete genome06962BLASTN svgBLASTP svg
NC_008245:707984*70798473119423211Francisella tularensis subsp. tularensis FSC 198, complete genome02690BLASTN svgBLASTP svg
NC_006570:707280*70728073124223963Francisella tularensis subsp. tularensis Schu 4, complete genome02690BLASTN svgBLASTP svg
NC_009749:221311*22131125459933289Francisella tularensis subsp. holarctica FTA, complete genome01808BLASTN svgBLASTP svg
NC_009749:289695*28969530981820124Francisella tularensis subsp. holarctica FTA, complete genome01806BLASTN svgBLASTP svg
NC_007880:221674*22167425368932016Francisella tularensis subsp. holarctica, complete genome01802BLASTN svgBLASTP svg
NC_009749:775837758310092723345Francisella tularensis subsp. holarctica FTA, complete genome01798BLASTN svgBLASTP svg
NC_008369:1702885*1702885175731754433Francisella tularensis subsp. holarctica OSU18, complete genome01788BLASTN svgBLASTP svg
NC_007880:1079634*1079634110602826395Francisella tularensis subsp. holarctica, complete genome01790BLASTN svgBLASTP svg
NC_007880:290059*29005931361823560Francisella tularensis subsp. holarctica, complete genome01790BLASTN svgBLASTP svg
NC_008369:221382*22138225459933218Francisella tularensis subsp. holarctica OSU18, complete genome01790BLASTN svgBLASTP svg
NC_008369:825158251510244819934Francisella tularensis subsp. holarctica OSU18, complete genome01792BLASTN svgBLASTP svg
NC_009749:1699152*1699152175595256801Francisella tularensis subsp. holarctica FTA, complete genome01796BLASTN svgBLASTP svg
NC_008369:291640*29164031483523196Francisella tularensis subsp. holarctica OSU18, complete genome01798BLASTN svgBLASTP svg
NC_008245:18455251845525186858823064Francisella tularensis subsp. tularensis FSC 198, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_015696:28545628545633044644991Francisella sp. TX077308 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_016050:1088223*1088223111009921877Rickettsia japonica YH, complete genome9e-0660BLASTN svgBLASTP svg