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Query: NC_009749:1825453 Francisella tularensis subsp. holarctica FTA, complete genome

Start: 1825453, End: 1845638, Length: 20186

Host Lineage: Francisella tularensis; Francisella; Francisellaceae; Thiotrichales; Proteobacteria; Bacteria

General Information: Isolated from an immunocompetent 56-year old male with bacteremic pneumonia in France. Francisella tularensis is a non-motile, aerobic, rod-shaped Gram-negative bacterium and is the causative agent of tularemia. This organism was first identified by Edward Francis as the causative agent of a plague-like illness that affected squirrels in Tulare county in California in the early part of the 20th century. The organism now bears his name. The disease, which has been noted throughout recorded history, can be transmitted to humans by infected ticks or deerflies, infected meat, or by aerosol, and thus is a potential bioterrorism agent. This organism has a high infectivity rate, and can invade phagocytic and nonphagocytic cells, multiplying rapidly. Once within a macrophage, the organism can escape the phagosome and live in the cytosol. It is an aquatic organism, and can be found living inside protozoans, similar to what is observed with Legionella.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008369:1830442*1830442185176221321Francisella tularensis subsp. holarctica OSU18, complete genome024070BLASTN svgBLASTP svg
NC_007880:1830803*1830803185098820186Francisella tularensis subsp. holarctica, complete genome024070BLASTN svgBLASTP svg
NC_008601:168063*16806319287624814Francisella tularensis subsp. novicida U112, complete genome022790BLASTN svgBLASTP svg
NC_018697:361339*36133938386822530Cycloclasticus sp. P1 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020291:1389114*1389114141138222269Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4e-1487.7BLASTN svgBLASTP svg
NC_009654:29402782940278295966519388Marinomonas sp. MWYL1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009654:3215205*3215205324567930475Marinomonas sp. MWYL1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004547:843475*84347586442120947Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014614:2434017*2434017245806724051Clostridium sticklandii, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015703:1992000*1992000201652924530Runella slithyformis DSM 19594 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013316:29680002968000299190223903Clostridium difficile R20291, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015633:2565753*2565753261159945847Vibrio anguillarum 775 chromosome chromosome I, complete sequence9e-0660BLASTN svgBLASTP svg
NC_009850:661802*66180268186120060Arcobacter butzleri RM4018, complete genome9e-0660BLASTN svgBLASTP svg