Pre_GI: BLASTP Hits

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Query: NC_009708:915814:938848 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 938848, End: 939339, Length: 492

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:809943:828705828705829196492Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-92337
NC_008149:3556999:357602935760293576520492Yersinia pestis Nepal516, complete genomehypothetical protein2e-92337
NC_010465:893921:912664912664913155492Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system effector, Hcp1 family2e-92337
NC_008150:844727:876138876138876629492Yersinia pestis Antiqua, complete genomehypothetical protein2e-92337
NC_010634:3720214:373921637392163739707492Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector2e-92337
NC_004088:3689000:370815337081533708644492Yersinia pestis KIM, complete genomehypothetical protein2e-92337
NC_005810:1467772:149117914911791491670492Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)2e-92337
NC_003143:1630000:166227416622741662765492Yersinia pestis CO92, complete genomehypothetical protein2e-92337
NC_005810:3917254:393870739387073939198492Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)2e-92337
NC_004088:2966331:298486729848672985358492Yersinia pestis KIM, complete genomehypothetical protein2e-92337
NC_006155:1756000:178167217816721782163492Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-92337
NC_003143:1059580:108004610800461080537492Yersinia pestis CO92, complete genomehypothetical protein2e-92337
NC_008150:317903:337604337604338095492Yersinia pestis Antiqua, complete genomehypothetical protein2e-92337
NC_008149:2802392:282093128209312821422492Yersinia pestis Nepal516, complete genomehypothetical protein2e-92337
NC_010634:1755548:178190317819031782394492Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector2e-92337
NC_006155:3805640:382613538261353826626492Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-92337
NC_017265:2586729:260526826052682605759492Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-92337
NC_017168:3977767:399630639963063996797492Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-92337
NC_017168:3286:247372473725228492Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-92337
NC_017160:1628500:165435116543511654842492Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-92337
NC_017154:902739:922440922440922931492Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-92337
NC_017154:1644404:167385716738571674348492Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-92337
NC_014029:961522:980295980295980786492Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-92337
NC_014029:1702338:173178417317841732275492Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-92337
NC_009708:874770:893523893523894014492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-92337
NC_009708:2788855:283854128385412839032492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-92337
NC_009381:588137:606893606893607384492Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-92337
NC_009381:1682000:170220017022001702691492Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-92337
NC_010159:3120642:314184631418463142337492Yersinia pestis Angola, complete genomehypothetical protein1e-91334
NC_010159:172469:181740181740182231492Yersinia pestis Angola, complete genomehypothetical protein1e-91334
NC_015062:130359:130359130359130850492Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion system effector, Hcp1 family5e-87319
NC_017060:125480:127189127189127680492Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion system effector5e-87319
NC_010501:3575726:359724435972443597747504Pseudomonas putida W619, complete genometype VI secretion system effector, Hcp1 family2e-86317
NC_016612:5600177:561645556164555616946492Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion system effector1e-85314
NC_012731:2302974:230468523046852305176492Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-85313
NC_009648:1487692:148940314894031489894492Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-85313
NC_010067:2529750:255257725525772553068492Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-83306
NC_020181:969599:989229989229989720492Enterobacter aerogenes EA1509E, complete genomePutative cytoplasmic protein USSDB7A5e-83306
NC_008563:3119284:312300631230063123497492Escherichia coli APEC O1, complete genomeputative hemolysin-coregulated protein4e-80296
NC_013956:4579759:459389845938984594425528Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein1e-79295
NC_012962:3568046:359502135950213595512492Photorhabdus asymbiotica, complete genomehypothetical protein1e-79295
NC_009832:1946401:196478119647811965272492Serratia proteamaculans 568, complete genomeprotein of unknown function DUF7962e-79293
NC_012962:3568046:358995535899553590446492Photorhabdus asymbiotica, complete genomehypothetical protein4e-79293
NC_005126:4919689:492595549259554926446492Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-77287
NC_007348:2011957:201195720119572012442486Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF7963e-71267
NC_016590:1183470:120668812066881207173486Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein8e-71265
NC_016835:128757:136918136918137409492Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,type VI secretion system effector4e-69259
NC_012721:1395417:141887514188751419360486Burkholderia glumae BGR1 chromosome 2, complete genomeHemolysin-coregulated protein8e-69258
NC_014118:1171411:119129111912911191776486Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion system effector, Hcp1 family1e-68258
NC_014306:642152:650001650001650492492Erwinia billingiae Eb661, complete genomeVirulence factor for secretion apparatus4e-66249
NC_007712:254000:263569263569264048480Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein7e-58222
NC_015061:2770856:278352327835232784008486Rahnella sp. Y9602 chromosome, complete genometype VI secretion system effector, Hcp1 family2e-56218
NC_010067:51000:608906089061372483Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-54209
NC_010067:892729:919954919954920442489Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-53207
NC_013850:4829455:483727848372784837769492Klebsiella variicola At-22 chromosome, complete genometype VI secretion system effector, Hcp1 family5e-50196
NC_015968:2195645:223124322312432231725483Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector4e-47186
NC_011283:4966471:497703349770334977512480Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system effector3e-43174
NC_007517:306508:312033312033312518486Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF7968e-27119
NC_002505:1507860:150963215096321510150519Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehcp protein9e-24109
NC_012578:1465302:146707414670741467592519Vibrio cholerae M66-2 chromosome I, complete sequencehcp protein9e-24109
NC_012668:2115228:213392121339212134439519Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHcp protein9e-24109
NC_016944:1504888:150666015066601507178519Vibrio cholerae IEC224 chromosome I, complete sequencehcp protein9e-24109
NC_009457:1068000:106810110681011068619519Vibrio cholerae O395 chromosome 2, complete sequencehcp protein2e-23108
NC_007492:2310793:233099623309962331511516Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF7964e-23107
NC_016602:2037162:205442320544232054941519Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehcp protein7e-23106
NC_008463:282565:288454288454288972519Pseudomonas aeruginosa UCBPP-PA14, complete genomeSecreted protein Hcp1e-22105
NC_009439:4913767:491983749198374920355519Pseudomonas mendocina ymp, complete genomehypothetical protein5e-22103
NC_020829:1307736:132614213261421326660519Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-21102
NC_008027:896000:896182896182896700519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A1e-21102
NC_008027:558507:558507558507559025519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1B1e-21102
NC_008027:4889662:491355949135594914077519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1C1e-21102
NC_002947:4604582:461052046105204611035516Pseudomonas putida KT2440, complete genomehcp protein9e-22102
NC_008027:5576458:559406755940675594585519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A2e-21101
NC_009436:3117661:315790631579063158064159Enterobacter sp. 638, complete genome2e-21101
NC_008027:3844355:387980238798023880302501Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 2A3e-21101
NC_016642:1234500:124842712484271248942516Pseudovibrio sp. FO-BEG1 chromosome, complete genometype VI secretion system effector1e-2099.4
NC_013941:261094:264076264076264594519Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHcp2e-2098.6
NC_002695:261235:264133264133264651519Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-2098.6
CU928160:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomeConserved hypothetical protein Aec16 (Hcp-like)2e-2098.6
NC_002655:261236:264134264134264652519Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-2098.6
NC_011353:261220:264118264118264636519Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-2098.6
NC_011741:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-2098.6
NC_013008:261226:264124264124264642519Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-2098.6
NC_008253:257059:263065263065263583519Escherichia coli 536, complete genomehypothetical hemolysin co-regulated protein2e-2098.2
NC_007946:258747:263740263740264258519Escherichia coli UTI89, complete genomehypothetical protein2e-2098.2
NC_011751:256830:261820261820262338519Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-2098.2
NC_011742:258746:263739263739264257519Escherichia coli S88 chromosome, complete genomehypothetical protein2e-2098.2
NC_014500:3097362:313812731381273138645519Dickeya dadantii 3937 chromosome, complete genomeHcp2e-2098.2
NC_015559:2745570:275060527506052751123519Marinomonas posidonica IVIA-Po-181 chromosome, complete genometype VI secretion system effector, Hcp1 family2e-2098.2
NC_008563:258725:263718263718264236519Escherichia coli APEC O1, complete genomehypothetical protein2e-2098.2
NC_014500:894136:914093914093914611519Dickeya dadantii 3937 chromosome, complete genomeHcp3e-2097.8
NC_013421:57961:652456524565763519Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family3e-2097.4
NC_011274:1129686:113485311348531135371519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-2097.1
NC_011149:1110642:111395011139501114468519Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp4e-2097.1
NC_011745:258727:263724263724264242519Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-2097.1
NC_012912:1701231:171793717179371718455519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family6e-2096.7
NC_012912:2901021:291846629184662918984519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family6e-2096.7
NC_016822:267758:273014273014273532519Shigella sonnei 53G, complete genomehemolysin co-regulated protein1e-1995.9
NC_010505:1205747:121487812148781215393516Methylobacterium radiotolerans JCM 2831, complete genometype VI secretion system effector, Hcp1 family2e-1994.4
NC_015968:4117835:412532441253244125842519Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector4e-1993.6
NC_016612:4823529:484601848460184846158141Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-1891.7
NC_014166:1751906:175350717535071754031525Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeHcp1 family type VI secretion system effector3e-1891.3
NC_008570:1986466:199051519905151991033519Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehemolysin co-regulated protein3e-1890.9
NC_014532:3596097:360886636088663609384519Halomonas elongata DSM 2581, complete genomeK068874e-1890.5
NC_009802:114749:147250147250147771522Campylobacter concisus 13826, complete genomesecreted protein Hcp5e-1890.1
NC_016445:984856:986816986816987145330Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehcp protein6e-1786.7
NC_016845:575123:595870595870596085216Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Hcp1 family type VI secretion system effector1e-1479
NC_009074:3559211:355975135597513560254504Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein1e-1375.9
NC_006350:3710641:371064137106413711144504Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein1e-1375.9
NC_009349:78000:780487804810171623669Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete3e-1374.3
NC_004578:2797493:280387428038742804389516Pseudomonas syringae pv. tomato str. DC3000, complete genomesecreted protein Hcp7e-1373.2
NC_013421:553193:570784570784571158375Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family4e-1270.9
NC_008390:407315:427925427925428428504Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function DUF7965e-1270.5
NC_007510:409843:426923426923427426504Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF7965e-1270.5
NC_014323:4619344:463245546324554632946492Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein2e-0858.5
NC_015381:429940:452091452091452594504Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative hemolysin-coregulated protein2e-0858.2
NC_011147:4460726:450007645000764500606531Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-0753.9
NC_012912:844339:852670852670853137468Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family1e-0652.4
NC_012125:4716000:474863547486354749081447Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein2e-0651.2
NC_014310:785220:807927807927808430504Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein (evpc-like), hemolysin-coregulated protein5e-0650.4