Some Help

Query: NC_009708:483253:505627 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 505627, End: 506013, Length: 387

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:1729922:175225417522541752640387Yersinia pestis A1122 chromosome, complete genomeputative cytochrome2e-54210
NC_014029:4057696:408002840800284080414387Yersinia pestis Z176003 chromosome, complete genomeputative cytochrome2e-54210
NC_009381:321577:343910343910344296387Yersinia pestis Pestoides F chromosome, complete genomecytochrome2e-54210
NC_003143:4105754:412808641280864128472387Yersinia pestis CO92, complete genomeputative cytochrome2e-54210
NC_013592:1668092:168930416893041689681378Dickeya dadantii Ech586, complete genomecytochrome b5622e-1064.7
NC_012912:1701231:174925417492541749631378Dickeya zeae Ech1591, complete genomecytochrome b5625e-1063.2
NC_010611:3879190:7676465390Acinetobacter baumannii ACICU, complete genomesoluble cytochrome b5621e-0962
NC_014500:3097362:309736230973623097739378Dickeya dadantii 3937 chromosome, complete genomeSoluble cytochrome b5623e-0960.8
NC_012880:1765920:178566217856621786039378Dickeya dadantii Ech703, complete genomecytochrome b5629e-0648.9