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Query: NC_009708:483253:504775 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 504775, End: 505419, Length: 645

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003143:4105754:412724041272404127878639Yersinia pestis CO92, complete genomehypothetical protein3e-123440
NC_017168:1729922:175143817514381752046609Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-117421
NC_017154:3997810:401932640193264019934609Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-117421
NC_014029:4057696:407921240792124079820609Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-117421
NC_009381:321577:343094343094343702609Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-117421
NC_007606:3842708:385915438591543859909756Shigella dysenteriae Sd197, complete genomehypothetical protein3e-69261
NC_013353:3853082:388902538890253889621597Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein7e-49193
AP010958:3853082:388902538890253889621597Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein7e-49193
NC_011745:291422:297377297377298057681Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-38158