Some Help

Query: NC_009708:483253:502584 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 502584, End: 503132, Length: 549

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:1729922:174908417490841749632549Yersinia pestis A1122 chromosome, complete genomehypothetical protein9e-81298
NC_017154:3997810:401697240169724017520549Yersinia pestis D106004 chromosome, complete genomehypothetical protein9e-81298
NC_014029:4057696:407685840768584077406549Yersinia pestis Z176003 chromosome, complete genomehypothetical protein9e-81298
NC_009381:321577:340740340740341288549Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein9e-81298
NC_003143:4105754:412491641249164125464549Yersinia pestis CO92, complete genomehypothetical protein9e-81298
NC_008150:4140804:415995641599564160504549Yersinia pestis Antiqua, complete genomehypothetical protein9e-81298
NC_009655:866281:868881868881869426546Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein7e-35146
NC_004347:4211241:423339742333974233930534Shewanella oneidensis MR-1, complete genomehypothetical protein3e-26118
NC_017512:760000:780982780982781557576Neisseria meningitidis WUE 2594, complete genomehypothetical protein3e-22104
NC_017505:841496:863533863533864045513Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein7e-22103
NC_010120:788000:809748809748810266519Neisseria meningitidis 053442, complete genomeconserved hypothetical protein4e-21100
NC_017517:867595:889554889554890060507Neisseria meningitidis M01-240355 chromosome, complete genomehypothetical protein6e-21100
NC_007973:2773427:279645927964592797067609Ralstonia metallidurans CH34 chromosome 1, complete sequenceprotein of unknown function DUF6153e-2098.2
NC_015276:1947936:196596219659621966495534Marinomonas mediterranea MMB-1 chromosome, complete genomeUncharacterized protein family UPF03076e-2097.1
NC_014910:1200605:120238812023881203056669Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein2e-1789