Pre_GI: BLASTP Hits

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Query: NC_009708:4182460:4204097 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 4204097, End: 4204684, Length: 588

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:1223042:123565412356541236268615Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein8e-51199
NC_012214:3502992:351053335105333511126594Erwinia pyrifoliae Ep1/96, complete genometype IV prepilin1e-23109
NC_008463:5246954:528481852848185285348531Pseudomonas aeruginosa UCBPP-PA14, complete genometype IV B pilus protein4e-0858.2
NC_018080:5091772:512980651298065130336531Pseudomonas aeruginosa DK2 chromosome, complete genometype IV B pilus protein4e-0857.8
NC_009656:4527457:461040146104014610931531Pseudomonas aeruginosa PA7 chromosome, complete genometype IV B pilus protein2e-0755.8
NC_004129:5373886:540727554072755407790516Pseudomonas fluorescens Pf-5, complete genometype IVB pilus biosythesis protein PliS3e-0651.6