Pre_GI: BLASTP Hits

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Query: NC_009708:2788855:2820654 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2820654, End: 2824076, Length: 3423

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2586729:2586729258672925901513423Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein02122
NC_017168:3977767:3977767397776739811893423Yersinia pestis A1122 chromosome, complete genomehypothetical protein02122
NC_009381:1682000:1683661168366116870833423Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein02122
NC_008149:2802392:2802392280239228058143423Yersinia pestis Nepal516, complete genomemembrane protein02122
NC_004088:2966331:2966331296633129697533423Yersinia pestis KIM, complete genomehypothetical protein02122
NC_010465:2820500:2847223284722328506453423Yersinia pseudotuberculosis YPIII, complete genomeImcF domain protein02114
NC_016612:4823529:4823529482352948269993471Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion system protein ImpL01340
NC_014121:1822895:1834869183486918383423474Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein ImpL01329
NC_013956:4579759:4579759457975945832923534Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein01288
NC_009648:1487692:1505225150522515085993375Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein01261
NC_012731:2302974:2318423231842323219263504Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein01250
NC_014837:3766426:3791881379188137952373357Pantoea sp. At-9b chromosome, complete genomeImcF domain-containing protein01143
NC_005126:3812054:3830821383082138341713351Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein01136
NC_005126:3812054:3819697381969738230683372Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein01135
NC_005126:3812054:3843641384364138470123372Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein01130
NC_012962:3568046:3578063357806335814103348Photorhabdus asymbiotica, complete genomesimilar to putative membrane protein of y. pestis01103
NC_012962:2639500:2648526264852626518913366Photorhabdus asymbiotica, complete genomesimilar to putative membrane protein of y. pestis01102
NC_012962:4427000:4437011443701144403073297Photorhabdus asymbiotica, complete genomehypothetical protein01058
NC_005126:4919689:4927191492719149305503360Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein01031
NC_017060:125480:1401031401031435193417Rahnella aquatilis HX2 plasmid PRA1, complete sequenceImcF domain-containing protein01011
NC_015062:130359:1432731432731466893417Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceImcF domain protein01011
NC_011283:942594:9464689464689498033336Klebsiella pneumoniae 342 chromosome, complete genomeImcF domain-containing protein0942
NC_009648:3476000:3487423348742334905003078Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein0937
NC_008563:3119284:3133547313354731368853339Escherichia coli APEC O1, complete genomehypothetical protein0932
NC_010501:3575726:3580163358016335835073345Pseudomonas putida W619, complete genomeImcF domain protein0923
NC_010067:2529750:2532006253200625353773372Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0880
NC_013282:2026083:2050468205046820537793312Cronobacter turicensis, complete genomehypothetical protein0873
NC_009436:3117661:3154619315461931579033285Enterobacter sp. 638, complete genomeImcF domain-containing protein0858
NC_009648:2465613:2467510246751024709203411Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein0828
NC_012731:3193880:3195777319577731991933417Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein0823
NC_016612:5600177:5603309560330956067283420Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein0822
NC_016845:3238507:3240404324040432438143411Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein0822
NC_011283:2103500:2116315211631521192812967Klebsiella pneumoniae 342 chromosome, complete genomeImcF-related family protein0803
NC_016626:400080:4228984228984264283531Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein6e-170598
NC_010552:592154:6071386071386109563819Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceprotein of unknown function DUF12152e-155550
NC_014539:3619511:3622840362284036263163477Burkholderia sp. CCGE1003 chromosome 1, complete sequenceImcF domain-containing protein1e-154547
NC_012721:1395417:1398827139882714023513525Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein2e-153543
NC_012721:240000:2571702571702606913522Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-151538
NC_014118:1171411:1172998117299811765823585Burkholderia sp. CCGE1002 chromosome chromosome 2, completeImcF domain protein3e-150533
NC_007348:2011957:2025768202576820292383471Ralstonia eutropha JMP134 chromosome 2, complete sequenceImcF-related:Protein of unknown function DUF12153e-150533
NC_007347:1:2498224982285963615Ralstonia eutropha JMP134 chromosome 1, complete sequenceImcF-related:Protein of unknown function DUF12155e-146519
NC_009255:2044291:2047201204720120507283528Burkholderia vietnamiensis G4 chromosome 2, complete sequenceImcF domain-containing protein3e-145516
NC_009255:1250939:1271735127173512752893555Burkholderia vietnamiensis G4 chromosome 2, complete sequenceImcF domain-containing protein6e-145516
NC_012721:710887:7242107242107277733564Burkholderia glumae BGR1 chromosome 2, complete genomeImcF-related protein4e-144513
NC_009778:1956225:1976281197628119776511371Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-137490
NC_014306:4376012:4390795439079543938933099Erwinia billingiae Eb661, complete genomePutative Type VI secretion system, ImcF domain-containing protein3e-134480
NC_007005:5882205:5882205588220558861373933Pseudomonas syringae pv. syringae B728a, complete genomeImcF-related:Protein of unknown function DUF12151e-35152
NC_005773:106000:1441241441241480443921Pseudomonas syringae pv. phaseolicola 1448A, complete genomeImcF-related family3e-35151
NC_014323:816027:8334198334198372943876Herbaspirillum seropedicae SmR1 chromosome, complete genometransmembrane protein2e-34149
NC_014323:4619344:4619344461934446231443801Herbaspirillum seropedicae SmR1 chromosome, complete genometransmembrane protein1e-33146
NC_010804:324396:3470683470683501543087Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-31138
NC_010084:3173757:3173757317375731777043948Burkholderia multivorans ATCC 17616 chromosome 1, completetype VI secretion protein IcmF4e-31137
NC_007510:409843:4438784438784478253948Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein1e-30135
NC_014931:6031645:6031645603164560354903846Variovorax paradoxus EPS chromosome, complete genometype VI secretion protein IcmF6e-28127
NC_003296:941920:9611259611259650663942Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN1e-23112
NC_014310:811977:8415608415608454893930Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein4e-23110
NC_014355:1865003:1882727188272718863563630Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-1895.9
NC_004605:1092476:1095070109507010985883519Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein9e-1480.1
NC_005126:349658:3568883568883604333546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1067.8
NC_005126:349658:3824313824313859763546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-1067.8
NC_015968:4117835:4135929413592941395883660Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein IcmF7e-1067.4
NC_018000:2964500:2989499298949929930293531Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein7e-0963.9
NC_012962:293976:3021943021943057393546Photorhabdus asymbiotica, complete genomehypothetical protein1e-0863.2
NC_012913:1832500:1849033184903318525303498Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein IcmF2e-0862
NC_004917:241053:2432372432372467913555Helicobacter hepaticus ATCC 51449, complete genomehypothetical protein6e-0860.8
NC_011740:1991941:2010341201034120138623522Escherichia fergusonii ATCC 35469, complete genomeIcmF-like protein1e-0656.6
NC_008570:2014151:2014151201415120176363486Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeImcF family protein4e-0654.7
NC_013892:274297:2849322849322885013570Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein8e-0653.5