Pre_GI: BLASTP Hits

Some Help

Query: NC_009708:2788855:2817531 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2817531, End: 2820572, Length: 3042

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016612:4823529:4839005483900548421303126Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein9e-175614
NC_016612:4823529:4832478483247848356153138Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-143509
NC_010465:2820500:285281228528122853246435Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein5e-75283
NC_014323:816027:8226548226548258663213Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein5e-62240
NC_008061:1864282:1873432187343218760082577Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencehypothetical protein7e-1997.1
NC_008543:582129:6051106051106076862577Burkholderia cenocepacia HI2424 chromosome 2, complete sequencehypothetical protein7e-1997.1
NC_010515:678000:6861576861576887182562Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencehypothetical protein8e-1893.2
NC_010805:1576735:1588809158880915913672559Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein1e-1276.3
NC_010086:871723:8839378839378864952559Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein1e-1276.3
NC_012721:1395417:1405989140598914088382850Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein8e-1273.6
NC_014307:1:2353823538263212784Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein1e-1069.3
NC_006350:2427000:2434826243482624376602835Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein4e-1068.2
NC_009074:1555500:1561144156114415639872844Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein3e-1068.2
NC_009076:1566500:1572177157217715750202844Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein3e-1068.2
NC_007434:1923000:1927959192795919308022844Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein3e-1068.2
NC_007963:2512478:2527564252756425301912628Chromohalobacter salexigens DSM 3043, complete genomehypothetical protein6e-1067.4
NC_014310:811977:8184438184438217933351Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein3e-0965.1
NC_003296:941920:9458059458059485822778Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSMEMBRANE PROTEIN4e-0964.3
NC_018691:2410779:2417835241783524206722838Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein5e-0964.3
NC_007651:3064530:3077299307729930803223024Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein3e-0861.6
NC_010681:1:1612116121189582838Burkholderia phytofirmans PsJN chromosome 1, complete sequencehypothetical protein5e-0860.8
NC_012962:4427000:4448040444804044506462607Photorhabdus asymbiotica, complete genomehypothetical protein1e-0759.7
NC_017267:1348005:1366336136633613696323297Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completehypothetical protein3e-0758.2
NC_017267:1348005:1354981135498113579652985Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completehypothetical protein3e-0758.2
NC_009256:1282793:1294998129499812978982901Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein7e-0757
NC_010681:1:1130511305141872883Burkholderia phytofirmans PsJN chromosome 1, complete sequencehypothetical protein1e-0553.1