Pre_GI: BLASTP Hits

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Query: NC_009708:2537557:2542259 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2542259, End: 2542519, Length: 261

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002927:2338549:235292423529242353295372Bordetella bronchiseptica RB50, complete genomephage-related putative DNA binding protein5e-1166.2
NC_002927:3716894:374633337463333746704372Bordetella bronchiseptica RB50, complete genomephage-related putative DNA binding protein5e-1166.2
NC_016902:2580774:258318725831872583438252Escherichia coli KO11FL chromosome, complete genomehypothetical protein3e-1063.9
CP002516:2580774:258318725831872583438252Escherichia coli KO11, complete genomehypothetical protein3e-1063.9
NC_008563:1475500:148875614887561489007252Escherichia coli APEC O1, complete genomehypothetical protein7e-1062.8
NC_016642:757964:769638769638770192555Pseudovibrio sp. FO-BEG1 chromosome, complete genomephage terminase small subunit6e-0959.3